| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2530 |
|---|
| Symbol | |
|---|
| ID | 7086096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 3008511 |
|---|
| End bp | 3010112 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643461423 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
|---|
| Protein accession | YP_002358447 |
|---|
| Protein GI | 217973696 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.616311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00580613 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAC TCGCTGACAT AGCCGTCAAT CGCAAACTCG CATTACAGCT CATCATCGCC
CTCGCAGGCG CCTTAATTTT ACTCGTTATT TCTGTTACCG CTTTAAAGCA CAATCTGATG
GTGGAGCGGG AAGCACGGCT TAATGCCGTA TTGTCCCTCG CCAGCAGCCG CATTCAGGCG
TTATCCCAAT CACTGCCCTT AGAGCAAGCA CAGCAAGCCG CCAAGGACAT GTTGAACGAC
ATGCGCTTTG ATAATGATAA CTACTTGTTT GTGATTGATG AATCGAGGCG CGTCATCGTC
CACCCCATCA AAAGAGAATT AGTTGGCCAA CAAATGGGCA ATCAAGGCGA AGAAAACTAC
TGGTACAAAA TGGTCGAACT CGGCCGTGAT GGCAAACAAG GCTTAGTCGA ATACCGCTGG
ACGACAGCTA ACGGTAAATC GGCGCAAAAA ATGTCACTGG TAATGGGATT TAAACCTTGG
GGCTGGATCT TGGGCTCAGG CATGTTGCTC CAAGATATCG AAGCCACCAT TTGGCATGAG
TATTTTGTCA TGGGAGGCAC GACATTAGTG CTTATCTTGC TCATGGCTTG GCTAGGTTAT
GCCATTAGTC ACTCTATCAC TCGGCCACTG GATGATGTAA ATCAGGCGAT GCTCGCCATC
ACAAAGGGGG ATTTAACCAC GCAATTAAAG GTCTATGGTA AAGACGAGCT TGGCACCTTA
GCCCATAACA TCAACCAAAG TATTGGCTCG ATTCGTAGCA CCTTACTGGA AGCAAGTCAT
AGCGCTGATA ATGTTGCCCA GGCCTCGGCT CGTATCGCCT CAACCGCGGA GGAAACCAAT
CAAGCGGTGA ATAATCAGCG GGATCAGCTT GCCCAGCTCG CCACCGCCAT GAATGAAATG
AGCGCCACTA TCGCCGATGT GGCAAACAAT GCGGAGAGCA CGGCCAAAGA TACCAAAGAA
GCCACCTGGG AAGCAGGCCT TGGCGACCAA GATGTTCACG CCAGTGTGGA CGGAATCCAT
GCCCTCGCCA AAGAAGTGGA GCAAGCGACG GATCAAGTGA ACATGCTTAA AGAGGAAGTC
ATGCAGATCA GCGAAGTGAC CTCAGTGATC AGCGCAATTT CAGATCAAAC TAACTTACTC
GCACTGAATG CCGCCATTGA AGCCGCCCGC GCAGGTGAGC AAGGACGAGG GTTTGCAGTG
GTCGCCGATG AAGTGAGACA ACTCGCCAGT CGCACCAGAC AATCAACCGA AGAAATTCAG
AACACGATTT CATTATTGCA ACAACGGGCT GTGAGCGCCG CTAAGGCAAT GGATGCAAGC
CGTGCACTGG CAGAAAACAG TGTGAGTCAA TCGGCAAAAG CGGGAAGTGA TTTATCGCTT
ATCGTAGCTC ACATCAAACA TGTGAGTGAC ATGGCGACCC ATATCGCTAC CGCCGCAGAA
GAGCAAAGTG TGGTCGCTGA AGACATGAAC AGAAACGTGT GCGGGATTAA TAACTCAGCG
CTCGAAGTCT CTGAATCGGC AACCTATCTC GCCCAAGAAA GTGAAAGTTT GGCGGAGTTA
TCACTGAATT TAAATGGCAA ACTCGCCGTT TTCAAACTCT GA
|
|---|
| Protein sequence | MFKLADIAVN RKLALQLIIA LAGALILLVI SVTALKHNLM VEREARLNAV LSLASSRIQA
LSQSLPLEQA QQAAKDMLND MRFDNDNYLF VIDESRRVIV HPIKRELVGQ QMGNQGEENY
WYKMVELGRD GKQGLVEYRW TTANGKSAQK MSLVMGFKPW GWILGSGMLL QDIEATIWHE
YFVMGGTTLV LILLMAWLGY AISHSITRPL DDVNQAMLAI TKGDLTTQLK VYGKDELGTL
AHNINQSIGS IRSTLLEASH SADNVAQASA RIASTAEETN QAVNNQRDQL AQLATAMNEM
SATIADVANN AESTAKDTKE ATWEAGLGDQ DVHASVDGIH ALAKEVEQAT DQVNMLKEEV
MQISEVTSVI SAISDQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRQLAS RTRQSTEEIQ
NTISLLQQRA VSAAKAMDAS RALAENSVSQ SAKAGSDLSL IVAHIKHVSD MATHIATAAE
EQSVVAEDMN RNVCGINNSA LEVSESATYL AQESESLAEL SLNLNGKLAV FKL
|
|---|
| |