| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1020 |
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| Symbol | |
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| ID | 5081716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1132084 |
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| End bp | 1133709 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640498145 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001182548 |
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| Protein GI | 146292124 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00762848 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCC TACAAATTAA ACAAAAAATG TTTATCGGTA TTTTAGTTCC ACTAATCATG
CTCCTTATGA TCGGTTTTAT TGCCGTAAAT ATGATGGGAA AAATTGAGGT TGGTGTCGAA
CGTATCTACA ACGACAGAGT GGTTCCACTT GATGACTTAA AAGTCATTGC TGATAAATAT
GCGGTAGATG TAATTGATGC CGTCAATAAG ACCAATGCTG GCGGTTTGAG CGCATCGGAT
GGTGCAAGTG CACTTGAAAA TGCAAAATCA ACCATTACTC AATATTGGCA AAAATATTTA
GCGACGGAGC TTACTTCAGA AGAATCAGTC TTAGCAAAAC AAGCTGAGGC ACTCTTTGCG
CCTGCAAACC AACAGATAAA TACCCTTACT GCACGCTTAA GAAGTTTAAA CGGTAATATC
ACAGGCCAAC TGAACGACAA TATTATGCCG CTCTACCACG CGATAGACCC CATCAGTGGC
AAAATATCGG AGCTAATTGC ATTACAGATC AAAATTGCAG GACAGGAAAA AAATACCGTT
AAAGACATTT ATCAATCGTC TATTACGATT TTCATCATCT TATCGGCTAT TGCCATGTTA
ATCAGTATCT TAATTGGCCT ATGGGTTAAC CGCAGTGTCA TGAACCCTAT CAGCGATATA
GTAAATAAGT TAAGGACCAT CCATCAACAT TCCGATCTCA CCATTAAGTT TAAGACCTTC
AATAATGATG AACTTGGGCA AATCTCAACT AGCCTAAGCC AAGTGATTGA GCACTTAAGA
GGTATTTTGA ATTCCATTGC CGAAGCGGCA AATACCGTTA ATCACTCAGC AACCGATCTT
AGTAGTTTTA CTCAAGCAAC CAATAAACGT ATGCAACAGC AACAAGCGGA GACAGAGCAA
ACTGCCACAG CAATGAACGA AATGACGGCA ACCGTTGCAG AAGTCGCCCA AAGTGCGGCT
GCAGCAGCCG ATTCAGCCAA AGATGCAGAT ACCTATGCTG CCAACGGTAA TAGTATTGTG
ATGCAATCCA TTGACAGTAT GTCGCAGCTT TCCGATCAAA TTCAAAAAAC GGCAAAAGTT
ATCGGCTTTT TGGCTAATGA AAGCCAAAAT ATTGGCCGAG TGCTCGATGT GATTAAAAGT
ATTGCGGAGC AAACTAATCT ACTGGCATTA AACGCCGCCA TTGAAGCCGC TCGCGCGGGG
GAACAAGGTA GAGGCTTTGC TGTCGTGGCC GATGAAGTAA GAACTCTTGC CCAACGTACC
CAAAAATCAA CCCAAGAAAT TGAAGCCATG ATAGCGACAC TACAGCAAGG CGTAAAAGAA
GCGGTAAGTG CCATGGAAAT AGGTATTCAT CAGGTGGATG ATGCCAATGA TAAAGCTAAT
CAGGCAGGTC AAGCGCTCAA AGAAATTGTC ACTTCTGTTG ATAGCATCAC GGAATTAAAT
ACCCACATAG CGACCGCAGC AGAAGAGCAA AGCAGTGTAG CAGAGAGCAT TAATCGCAGC
ATTATTGCCA TTAGCGATAT TGCCGAACAC TCTACAACAT CGGCGGCTGA GTTAAGTGAG
TCGGTGATAA ATTTAACAAA ACTCGCCAGC AGTATGCGCA ATCAAGTCAG TGCCTTTAAA
CTCTAA
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| Protein sequence | MNGLQIKQKM FIGILVPLIM LLMIGFIAVN MMGKIEVGVE RIYNDRVVPL DDLKVIADKY
AVDVIDAVNK TNAGGLSASD GASALENAKS TITQYWQKYL ATELTSEESV LAKQAEALFA
PANQQINTLT ARLRSLNGNI TGQLNDNIMP LYHAIDPISG KISELIALQI KIAGQEKNTV
KDIYQSSITI FIILSAIAML ISILIGLWVN RSVMNPISDI VNKLRTIHQH SDLTIKFKTF
NNDELGQIST SLSQVIEHLR GILNSIAEAA NTVNHSATDL SSFTQATNKR MQQQQAETEQ
TATAMNEMTA TVAEVAQSAA AAADSAKDAD TYAANGNSIV MQSIDSMSQL SDQIQKTAKV
IGFLANESQN IGRVLDVIKS IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRTLAQRT
QKSTQEIEAM IATLQQGVKE AVSAMEIGIH QVDDANDKAN QAGQALKEIV TSVDSITELN
THIATAAEEQ SSVAESINRS IIAISDIAEH STTSAAELSE SVINLTKLAS SMRNQVSAFK
L
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