More than 300 homologs were found in PanDaTox collection
for query gene Sama_2880 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  69.13 
 
 
554 aa  736    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  69.13 
 
 
554 aa  735    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  68.77 
 
 
554 aa  751    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  69.96 
 
 
554 aa  747    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  60.54 
 
 
555 aa  661    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  69.4 
 
 
554 aa  737    Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  69.13 
 
 
554 aa  738    Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  63.9 
 
 
554 aa  699    Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  69.98 
 
 
554 aa  736    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  69.12 
 
 
568 aa  742    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  65.52 
 
 
554 aa  706    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  69.68 
 
 
554 aa  741    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  70.17 
 
 
554 aa  747    Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  69.86 
 
 
554 aa  736    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
558 aa  1134    Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  69.86 
 
 
554 aa  738    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  70.54 
 
 
554 aa  752    Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  69.79 
 
 
554 aa  737    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  63.27 
 
 
554 aa  677    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  69.98 
 
 
554 aa  739    Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  66.79 
 
 
554 aa  738    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  71.11 
 
 
554 aa  754    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  69.49 
 
 
554 aa  733    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  43.37 
 
 
564 aa  449  1e-125  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  42.1 
 
 
557 aa  407  1.0000000000000001e-112  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  35.98 
 
 
564 aa  341  2e-92  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  37.08 
 
 
561 aa  327  3e-88  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  36.72 
 
 
561 aa  323  6e-87  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  35.84 
 
 
560 aa  315  9.999999999999999e-85  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_009831  Ssed_2783  methyl-accepting chemotaxisprotein  38.25 
 
 
690 aa  310  2.9999999999999997e-83  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.468562 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  36.67 
 
 
559 aa  310  4e-83  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  35.01 
 
 
553 aa  302  1e-80  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  34.23 
 
 
553 aa  293  4e-78  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  35.94 
 
 
543 aa  288  2e-76  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
558 aa  286  5e-76  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  36.42 
 
 
548 aa  285  1.0000000000000001e-75  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  35.42 
 
 
560 aa  285  2.0000000000000002e-75  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  31.68 
 
 
545 aa  281  2e-74  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1498  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
687 aa  281  2e-74  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000111484  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  49.4 
 
 
637 aa  276  6e-73  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  32.21 
 
 
569 aa  272  1e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_004578  PSPTO_3237  methyl-accepting chemotaxis protein  41.88 
 
 
771 aa  271  2e-71  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  31.86 
 
 
549 aa  269  1e-70  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  40.71 
 
 
578 aa  268  2e-70  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  33.57 
 
 
548 aa  267  2.9999999999999995e-70  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  31.67 
 
 
556 aa  266  5e-70  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  35.52 
 
 
543 aa  266  5.999999999999999e-70  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  32.82 
 
 
554 aa  266  8e-70  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
549 aa  265  2e-69  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0520  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
561 aa  264  4e-69  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.859036  n/a   
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
545 aa  263  4.999999999999999e-69  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  35.58 
 
 
544 aa  263  6.999999999999999e-69  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  42.07 
 
 
643 aa  263  6.999999999999999e-69  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  42.94 
 
 
713 aa  262  1e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  39.05 
 
 
632 aa  261  2e-68  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_007492  Pfl01_2554  chemotaxis sensory transducer  39.59 
 
 
663 aa  262  2e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.486048 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  44.87 
 
 
637 aa  261  2e-68  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  35.42 
 
 
544 aa  261  2e-68  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  33.97 
 
 
549 aa  260  4e-68  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1845  methyl-accepting chemotaxis sensory transducer  34.03 
 
 
545 aa  260  4e-68  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  33.54 
 
 
546 aa  260  5.0000000000000005e-68  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  45.16 
 
 
716 aa  259  6e-68  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  34.03 
 
 
545 aa  259  8e-68  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.97 
 
 
546 aa  259  8e-68  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
545 aa  259  1e-67  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
545 aa  258  1e-67  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
545 aa  259  1e-67  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.74 
 
 
630 aa  258  2e-67  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
630 aa  258  2e-67  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.22 
 
 
545 aa  258  2e-67  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  43.3 
 
 
712 aa  258  2e-67  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  35.52 
 
 
544 aa  258  3e-67  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  33.75 
 
 
545 aa  257  3e-67  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  33.96 
 
 
545 aa  258  3e-67  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  43.3 
 
 
712 aa  257  4e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
548 aa  257  5e-67  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
544 aa  256  8e-67  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  46.67 
 
 
636 aa  256  1.0000000000000001e-66  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
548 aa  255  2.0000000000000002e-66  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
544 aa  254  2.0000000000000002e-66  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3044  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
688 aa  254  2.0000000000000002e-66  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
630 aa  254  2.0000000000000002e-66  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
630 aa  253  5.000000000000001e-66  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2412  methyl-accepting chemotaxis sensory transducer  34.74 
 
 
545 aa  253  6e-66  Shewanella sediminis HAW-EB3  Bacteria  normal  0.516535  hitchhiker  0.00000653474 
 
 
-
 
NC_009783  VIBHAR_02418  hypothetical protein  39.83 
 
 
578 aa  253  7e-66  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0122  methyl-accepting chemotaxis protein  33.63 
 
 
553 aa  252  1e-65  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4216  methyl-accepting chemotaxis sensory transducer  38.71 
 
 
647 aa  252  1e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  36.9 
 
 
630 aa  251  2e-65  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  37.11 
 
 
630 aa  251  3e-65  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  40.76 
 
 
630 aa  249  8e-65  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  31.41 
 
 
565 aa  248  1e-64  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
634 aa  249  1e-64  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  40.76 
 
 
630 aa  249  1e-64  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
674 aa  249  1e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_011663  Sbal223_0226  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
527 aa  245  9.999999999999999e-64  Shewanella baltica OS223  Bacteria  normal  normal  0.16836 
 
 
-
 
NC_009997  Sbal195_4233  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
525 aa  244  3e-63  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000524679 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  32.11 
 
 
540 aa  244  3e-63  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0756  methyl-accepting chemotaxis protein  31.66 
 
 
558 aa  243  5e-63  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4711  methyl-accepting chemotaxis protein  37.56 
 
 
633 aa  243  7e-63  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_4113  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
527 aa  243  7e-63  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
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