Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2601 |
Symbol | |
ID | 3714202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2978382 |
End bp | 2980091 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | chemotaxis sensory transducer |
Protein accession | YP_348332 |
Protein GI | 77458826 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.441915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.36116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGTC ACCGAAACGT GGTTGGATGC TGGCGGTGGT TTATTACAAG AAAAAGAATC CGGAGTGACA GCGTTATGAA CAGCTTGCGC AGTGTGTCGA TCAGCCGACG CTTGTGGCTC ATCTTGATTG TGGCCGTGGT CATGCTGTTG ACGTTGGGCG TGTTGATGCT CAAGCAGATC CATGATGACC TCTACCACGC CAAGGCCCAG AAAACCCAGC ATGTGGTGCA GACCGCCAGC GGTTTGCTGA CTTACTACCA AGGCCTCGAA GCCGCAGGAA CCCTGACCCG CGATGTGGCA CAGAAACAGG CGCTGACCGC GATCCGTGGC CTGCGCTATG ACCAGAATGA CTATTTCTGG ATCAACGACC TCACGCCCGT GATGGTCATG CACCCGACCA ATCCCAAGCT CGAAGGCCAG AACCTCTCGG CGATCCGCGA CCCGGACGGT TTCGCGGTGT TCAATGAAAT GGTCGCCATC GCCAAGGCCA AGGGCGCCGG CATGGTCGAC TATCGCTGGC CCAAGCCCGG TGCCAGTGAA CCGGTGGCCA AGACCTCTTA CGTGAAATTG TTCGAGCCTT GGGGCTGGGT GATCGGTTCC GGCGTTTACG TCGATGACGT GCAGGCCGAG TTCCAGGGCC AGGTGATCAA GGCGTCGGTG GTAGGTCTGG TCATCGCGGT GATCATGGCG TTGCTGGTGA TTCTGATTGC CCGCAGCATC GTCCGTCCGT TGCAAGAAAC CGTGAACGCC ATGGCCAACA TCGCCAGCGG CGAAAGCGAC CTGACCCGTA GTCTCGATAC CCACGGCCAG GACGAAGTCA CTCAGCTGGC CCATCACTTC AACGCCTTCA CCGCCAAGCT GCGCCGGGTG ATCGGTGACT TGCAGGTGTC CGCCAGCGCT TTGGGCCAAT CGTCCAGCGA ACTGGGCAAC GACGCGGCGC AAGCGCAGCA ACGCAGCCAG CAGCAGTCAC AGCAGATGGA GCTGGTGGCC ACTGCCGTCA ACGAAGTGAC CTACGGCGTG CAGGACGTGG CGAAAAACGC CGAACACGCT GCCAGCGAAA TGCGTGATGC CGAAGCCCAG GCGCAACAGG GCCAGATCAA CATCGACGGC AGCCTGCAAC AGATCGACAA GCTCTCCGGC ACCATCGATC AGGCCGTCGA GGTCATCCGC ACGCTGGCGA CCGAAAGCAC GCAGATCGGC AGCGTGCTGG AAGTGATCCG CTCGATTGCC GAGCAGACCA ACCTGCTGGC CCTCAACGCC GCGATTGAAG CGGCTCGCGC TGGCGAACAG GGTCGCGGTT TTGCGGTGGT TGCTGACGAA GTACGTTTGC TGGCTCAGCG CACGCAGAAG TCCACGGCGG AAATCCAGAC GATGATCGAA AGCCTGCAAA ATCATTCCGA AGCCGCCGTG AAGGTGATCG GCGACAGCAG CAAGGCTTCG CAACTGACCA TCGAACAGGC CGGCCTGGCC AGTGCGAGCC TGAATGCGAT CGGCCAGGCC CTGCGCAACC TCAATGGTCT GAACGCCTCG ATTGCCAGCG CAACGCTGCA ACAGGCGCAC GTGGTCGAAG ACATCAACCA GAACGTCACC CAGGCCGCGG GCCTGTCCCA CAGCACCGCG CTGGCGGCCG AGCAGTCGAG CGTGGCCAGC GTGAAACTCG GCCAGCTCAG CGAACAACTG AACGGGCTGC TGCGCCAGTT CCGAGTCTGA
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Protein sequence | MPGHRNVVGC WRWFITRKRI RSDSVMNSLR SVSISRRLWL ILIVAVVMLL TLGVLMLKQI HDDLYHAKAQ KTQHVVQTAS GLLTYYQGLE AAGTLTRDVA QKQALTAIRG LRYDQNDYFW INDLTPVMVM HPTNPKLEGQ NLSAIRDPDG FAVFNEMVAI AKAKGAGMVD YRWPKPGASE PVAKTSYVKL FEPWGWVIGS GVYVDDVQAE FQGQVIKASV VGLVIAVIMA LLVILIARSI VRPLQETVNA MANIASGESD LTRSLDTHGQ DEVTQLAHHF NAFTAKLRRV IGDLQVSASA LGQSSSELGN DAAQAQQRSQ QQSQQMELVA TAVNEVTYGV QDVAKNAEHA ASEMRDAEAQ AQQGQINIDG SLQQIDKLSG TIDQAVEVIR TLATESTQIG SVLEVIRSIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRLLAQRTQK STAEIQTMIE SLQNHSEAAV KVIGDSSKAS QLTIEQAGLA SASLNAIGQA LRNLNGLNAS IASATLQQAH VVEDINQNVT QAAGLSHSTA LAAEQSSVAS VKLGQLSEQL NGLLRQFRV
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