| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3044 |
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| Symbol | |
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| ID | 4922783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3615299 |
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| End bp | 3617365 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164654 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001095169 |
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| Protein GI | 127513972 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA CAATAAAAGC TAAACTAATC ATATTAGTAG GTGCTTTACT TGTCGCGGTA
TCGGGCTTGT TTATCATCAA CACCTATATC ATCGCGCAAG AAGTCCTGAA GCAGGAACAA
AGCAACATCA ACCAACAGGT TGAAGCCCTC ATCAAACAGA ACCTCATCGG CCAAGTCGAC
ACCCTAAGCC GCTCCGTCAA CGACTTCTAC CAACAATCCC GAGAAGCCAA CATCAAGCAG
GCGCTGGGGG ATGAGATAAA GATGTTCCGC GATGTCATTA ATCGCATGTA CGAGAACAAC
CTCACCGACG ATGCCGCCAT GATGGTCTAC ACCTTCCTCA ATGAGTATCA ATGGGGTAAC
GGCCGCTACC TGTTTGCCTA CAACGCCGAC ACCCTGGAGA ATGAGGCGTC CGGCATGGGC
GGCGTCTCCA TGGGTAACAG CCGCGACGCC CTGGACGAGA AGGGTAACTA CTATGCCCGG
GACATAGTCG CCGCCGCTAA GTCCAAACCC ATAGGCTTTA CCAGCTACTT CTTCTCCAAT
CCCTCGACCG GTCAAGTGGA AGAGAAACTC TCGGCCTCCT TCTACTTCGA GCCGCTCAAT
CTGGTGATCG CCACCGGGGA ATATGTCAGC ACATTGAAAC AAGACAAACT CAATAGTGCA
CTGCAGACCG TGCTGGCGGC CAAGTTTGGC GAAGACGGCC ACTTCTGGGT ACAGGACAGT
GACGGCAAGA TATTAGCCCA CTCGCAGTCA TCTCAAATAG GGCGAATCAC GCCAAACGCC
GCCAAGGCGA AACAGGCACT CGGCAACCAA GCGGATGCCT TCGTCGCCTT ACCTGTCACC
GACCCTAAGA CCCACAGCCA AGAGACGCAG ATCGCCTATG TCAGAAAGAT CCTCCCCGAG
TGGGGCTGGG TGATAGGCAC CGGCACCTAT GAGTCCAACA TCAGCGCCAT CGAACAGAGG
CTCACCGCCG GTACTGAGGC GATATTCAAA CAGAAAATTT ACCGCAGCAT CGCCATTGCC
AGCCTGCTTA TCATCATCGC ACTGGCGTTT TGCGTATTCC TGCTCAACAA GATCATCGCC
GACATGGTGA TGCTGAAAAA CCGCATCGAC ACCCTCTCCA CCGGCGACGC CGACCTCACC
TCCAGATTGG CCATCACCAG CAAGGATGAA CTGGCGGCCA TCGGCCACTC GGTTAACAGC
TTCATCGGCT ACCTGCAGGC CATGATGCTG GAGATCTCCC ACGCCTCACA GAAGATCACC
CAGGGGATAG GCCAACTCGA CAGCCACTCG GAAAACAATC GTCAGGCGCT GAGTAAACAC
AGCAGCGAGA CAGAGCTTGT GGTCACCGCC ATCAGCCAGA TGAATGCCTC GGCAGACGCC
GTGGCCCAGA GCGCGGGCAA GATGGCCGCC AGCACGCATC AGGCCAACGA AGAGGCCAAG
ACCTCGACCC TCACCGTCTC GGATGCTGCC GGCAGCGTCC AGGCACTGGC GAACGAGATG
AACTCGGCCA GCCAGAGCAT TCACACCATG AGCGAGAACA CCAATCAGAT CATCTCGGTA
TTGGGGGTGA TCAAGGAGAT CGCCGATCAA ACCAACCTGC TGGCACTTAA TGCCGCCATC
GAGGCGGCCC GGGCCGGCGA GCAGGGACGC GGTTTTGCCG TGGTGGCCGA TGAGGTGCGC
TCACTCGCCT CTCGCACCCA GTCCTGCACC ACACAGATAG AGCAGATCCT CACCACCCTG
AGACGCGACG CCGACACCGC AGAGCAGCTG ATGCTGGAAA CCCAAAACAG CTGCCAGCAA
GTCACCCAAA ATACCGCCCG CGTCACCTCA AATCTGGGCG CCGTCACCGA CTCCATCGCC
GAGCTCAACG ACCTGGGCGG CCAGATCGCC AGCGCCTCAG AGCAGCAGAG TGTGGTAACG
GCCGAGATCA GCCAAAACAT GCACACCATA GAGGCGATGG CCCAGACCCT GCTGCAAAAC
GGCCAGCAGA CACTGGAAAG CACCCAGAGC CTGTCGGCCG CCAATCAACA GCTAAGCGCC
ATGGTGAGAA AATTCAAGCT AGCCTAG
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| Protein sequence | MKITIKAKLI ILVGALLVAV SGLFIINTYI IAQEVLKQEQ SNINQQVEAL IKQNLIGQVD
TLSRSVNDFY QQSREANIKQ ALGDEIKMFR DVINRMYENN LTDDAAMMVY TFLNEYQWGN
GRYLFAYNAD TLENEASGMG GVSMGNSRDA LDEKGNYYAR DIVAAAKSKP IGFTSYFFSN
PSTGQVEEKL SASFYFEPLN LVIATGEYVS TLKQDKLNSA LQTVLAAKFG EDGHFWVQDS
DGKILAHSQS SQIGRITPNA AKAKQALGNQ ADAFVALPVT DPKTHSQETQ IAYVRKILPE
WGWVIGTGTY ESNISAIEQR LTAGTEAIFK QKIYRSIAIA SLLIIIALAF CVFLLNKIIA
DMVMLKNRID TLSTGDADLT SRLAITSKDE LAAIGHSVNS FIGYLQAMML EISHASQKIT
QGIGQLDSHS ENNRQALSKH SSETELVVTA ISQMNASADA VAQSAGKMAA STHQANEEAK
TSTLTVSDAA GSVQALANEM NSASQSIHTM SENTNQIISV LGVIKEIADQ TNLLALNAAI
EAARAGEQGR GFAVVADEVR SLASRTQSCT TQIEQILTTL RRDADTAEQL MLETQNSCQQ
VTQNTARVTS NLGAVTDSIA ELNDLGGQIA SASEQQSVVT AEISQNMHTI EAMAQTLLQN
GQQTLESTQS LSAANQQLSA MVRKFKLA
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