| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_07022 |
|---|
| Symbol | |
|---|
| ID | 5558426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 2097579 |
|---|
| End bp | 2099240 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640911490 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001449123 |
|---|
| Protein GI | 156978217 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGA CGATCAGAAA ACGACTATAT ATCCTTTCAA TAATTCCAAT TCTAACCATG
GCAATAGGCA TGATGTGGTT TACCTATCTG CAAACCACGG CCTATAACGA ACAAGAAATT
GAGCAGACTC GAAGTCAAAT GATGGAGATG AAAAAAGCTG AGCTCAAAAA CTACGTTCAA
CTCGCTCGCT CTGCTGTTGA GCCACTGCTC GCTCAAAACG CCCCACTAGA TGAAGCATTG
CCTATTTTGC AGCAGTTGGA GTTTGGCCAA TCCGGCTACA TCTTTGGCTA CGATTCAAAA
GGCGTTCGCG TTGTGACGGG TCAAAACACC AAAGGCATCG GAGAAAATTT CTATAACTTG
CAAGACAAGA AAGGCAATTA CCTGATTCAG GATTTGCTCA ACAATTCCAA AACCGGAGAG
TTCACGACTT ATTACTTCCC GAAACTCGGT CAGAGCGAAG CACTACCGAA ACTGAGCTAC
TCGGTGTTTA TTCCTGAATG GGATTTGATG CTGGGTACAG GCTTTTACAC TGACGATATC
GACGCCATTA TCGCGAGCAT GGAAGACTCA GCGCATCAAG CCTTGAATAC CACACTGACT
GCAATCGCCC TGTTCTGTGT CTCGATTGCC GCCATCGTTG CGATCTTCGC GGTGTTCGTT
AACCGCAGCA TCATGAAGCC GATTGAACAG TTTGATGCTT CGATTCACTC TTTCGCACAA
GGCGATGCAG ACCTGACCGC ACGCATGGAA GAATCAAGCG TACCGGAGTT CACCCAGCTT
AGCCGCAACT TCAATACCTT TGTTGAGAGC CTACAAAGCA TCATCAAGAG CGTTAGCCAC
GTAGGGCAAG AAGTGGTTTC AGAAACCAAT CACATGTCAC AGCGAGCTTC TCAGGTGGAT
GAGCTGGCGT CTGGCCAACG AGAAGAGACG GAACAAGTCG CTGCGGCAAT GACTGAAATG
ACGGCAACAG CGCACGAGAT TTCAAGCAAC GCTAATCAGG CTGCGCAATC AGCAAAAGAT
GCCGATAAAA ACTCACAGCA AGCGAAGCAC ATTGTTGATT CAGCAGCGAA CTCCGTCGAA
GCCCTTGCTT TAGAAGTTTC AGAAGCCAGC ACGGTGATTT CTCGTTTAGA GAGCGATGTA
CAAAACATTT CTTCTTCGCT AGAAGTGATT CAAGATATTG CCGAGCAAAC CAACCTATTG
GCACTAAACG CCGCTATTGA AGCAGCCCGT GCAGGCGAAC AAGGTCGCGG CTTCGCAGTC
GTTGCCGATG AGGTTCGTAA ACTGGCGAGT CGCACTCAAG ACAGCACAGG CGAAATTCAC
CAAATGATTG AGCAGTTGAA GTCTGGCTCG GATGCGGCAG TGAAAGCGAT GGGCTCAAGC
CAAGCGCGTG GTGAAGCTAC GGTTGAAGAG GCAAGAGCTG CCTCTGCCGC ACTGCAAGAA
ATCCAAGCCG CAATTGCTAA CATCATGGAC ATGAACACAC TGATCGCAAC GGCAACCGAA
GAGCAAAGCC AAGTTGGGCA AGAGATTTCA CAGCGCATCG AAGTGATCTC TCAACAAAGC
AGTCAGTCGG CAAGCCTTGC GAATCAAAAC CGTGCAGGCA GTGGCAACCT TAACCACAAA
GCCAACGAGC TGTACGACTT AGTCGGTCGC TTTACGGTCT AG
|
|---|
| Protein sequence | MNLTIRKRLY ILSIIPILTM AIGMMWFTYL QTTAYNEQEI EQTRSQMMEM KKAELKNYVQ
LARSAVEPLL AQNAPLDEAL PILQQLEFGQ SGYIFGYDSK GVRVVTGQNT KGIGENFYNL
QDKKGNYLIQ DLLNNSKTGE FTTYYFPKLG QSEALPKLSY SVFIPEWDLM LGTGFYTDDI
DAIIASMEDS AHQALNTTLT AIALFCVSIA AIVAIFAVFV NRSIMKPIEQ FDASIHSFAQ
GDADLTARME ESSVPEFTQL SRNFNTFVES LQSIIKSVSH VGQEVVSETN HMSQRASQVD
ELASGQREET EQVAAAMTEM TATAHEISSN ANQAAQSAKD ADKNSQQAKH IVDSAANSVE
ALALEVSEAS TVISRLESDV QNISSSLEVI QDIAEQTNLL ALNAAIEAAR AGEQGRGFAV
VADEVRKLAS RTQDSTGEIH QMIEQLKSGS DAAVKAMGSS QARGEATVEE ARAASAALQE
IQAAIANIMD MNTLIATATE EQSQVGQEIS QRIEVISQQS SQSASLANQN RAGSGNLNHK
ANELYDLVGR FTV
|
|---|
| |