Gene Swoo_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2617 
Symbol 
ID6116916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3198861 
End bp3200507 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content42% 
IMG OID641634149 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001760989 
Protein GI170726963 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.224982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.210295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCGA TTAATCAACT GTTTAGAAAG ATAAAAATAT CTAAGCGTCT TTTATTGATG 
CTAGTCTTGT CTATCGTAGC GACCTTGTTA ATGTTTCTAT TTGCGTTGAA TAATATCGAT
AACTTGTTGT TTAAAGAGAA AGAGGGCAAG TTAAGTTCAT TGGCGGATGT GGGCGTAAAG
GTCGTTGAGA GGTATTATCA AAGTGCTCAA AATGGTCTTA TGACGGAAAG TGAAGCGAAG
GAGGCGGCAA TCATCGCTTT AGATGCATTG CGCTATGCGG GTAAAGAGTA TTACTGGACA
ATAGATACTC AAGGGATCAT GGTTCAGCAT GCATTTGCTA AAAAGCTTGT GGGAACAAAT
GTGCTGGGTA TGAAAGATCC CAATGGAGTT CAACTCTTTC AGTTAATGGT CACGGGGACT
GAGCAGAGTG AGTCTACCCG AGTTGAGTAT ATGTGGAATC GTCCCGATGC CACCGAGCCA
AGTCCGAAAA TGAGCGTTGT CAAAAGATTC AAACCTTGGG GCTGGATTGT TGGGACTGGA
ATATATGTTG ATGATATAAA AGCACAGCAA GCCATTTTTG CCTGGCAATA TCTGTTAATT
GGAGCCTTGG TTTGGTTACC AGTTATCTTA ATTCTACTGA TTATCTCCCA AAGTATCTCC
AAACCTTTAA GACAGACGAT TTTAGCGCTG GAAAATATCT CTAAGGGCGA GGGGGATTTG
ACCTTAAGGT TAGAGGAGTC AGGTAATGAT GAGCTTAAAG AGGTAGCAAC AAACTTTAAT
GTGTTCGTGA TTAAGATACA GGCTGTTGTT GAGTCTGTTT TGAGCTCCGT GACCCATAGT
CAGCAGTTAG CTTCTGGACT TTCTACCATA TCTAGCGAAG CCAATACGGT GACGGCAAAT
ATGCAGACAG AAACTGAAAG TGTTGCGACA GCAATCAATG AGATGTCAAT GGTTGCGACA
GAGGTAGCGT TGAATGCAAA AAATGCGGCT GAAAGTGCAT CGGGCGCCGA CGCGGAAGCC
AATAAGACTA CTATGGTGGT CGATAGTGCA GTAAATAAAA TAAACGAGTT GTCCAAAGAG
TTAGAGGTGA CCTCCAGTGG TGCTGAAGGG CTGAGAGTCA GCTCAGGAAA AATAGGTCAA
ATCCTTGATG TCATAGTTGG GATAGCAGAG CAGACTAACC TACTTGCACT AAATGCGGCG
ATTGAGGCTG CAAGAGCTGG TGAGGCTGGG CGTGGTTTTG CTGTTGTTGC CGATGAAGTT
AGAAGTTTAG CCAGTAAGAC ACAGGAATCA ACTCAAGAGA TTAATGGCAT TATTGATGCG
ATACGTGAGG CCATTATCTG TGTTAATGAT TCTGTGGACA GGGCTAAAAA CTGTTCAAGT
CAAACGGTTG ATGAGACTAA GCAGGTTGTT GACGCACTGG AGATGATTAA AGCCTCTATT
GGACAAATAT CAGATATGAA TGTGCAGATA GCTACCGCAA CTGAAGAGCA AAGCTCAGTG
ATTGCAGAGC TCAACATGAA TGTTACACGT ATCAATGATA TTTCATTAGA CAATCAACAC
AAGAGTGTTC AAATTGGGCA AACCAGCGAG CAGATATTGC AAGGTTCTTC CGAATTGAAT
GGGTTAGTTT CAAACTTTAA AGTCTAA
 
Protein sequence
MDSINQLFRK IKISKRLLLM LVLSIVATLL MFLFALNNID NLLFKEKEGK LSSLADVGVK 
VVERYYQSAQ NGLMTESEAK EAAIIALDAL RYAGKEYYWT IDTQGIMVQH AFAKKLVGTN
VLGMKDPNGV QLFQLMVTGT EQSESTRVEY MWNRPDATEP SPKMSVVKRF KPWGWIVGTG
IYVDDIKAQQ AIFAWQYLLI GALVWLPVIL ILLIISQSIS KPLRQTILAL ENISKGEGDL
TLRLEESGND ELKEVATNFN VFVIKIQAVV ESVLSSVTHS QQLASGLSTI SSEANTVTAN
MQTETESVAT AINEMSMVAT EVALNAKNAA ESASGADAEA NKTTMVVDSA VNKINELSKE
LEVTSSGAEG LRVSSGKIGQ ILDVIVGIAE QTNLLALNAA IEAARAGEAG RGFAVVADEV
RSLASKTQES TQEINGIIDA IREAIICVND SVDRAKNCSS QTVDETKQVV DALEMIKASI
GQISDMNVQI ATATEEQSSV IAELNMNVTR INDISLDNQH KSVQIGQTSE QILQGSSELN
GLVSNFKV