Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2327 |
Symbol | |
ID | 4606000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2791205 |
End bp | 2792869 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781725 |
Product | putative methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_928202 |
Protein GI | 119775462 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.644098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.637343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGTCGA ATATCGAGGT GCTTATGCTT GGCCACTATC TGAGAAATTA CAATATTTCA CGCCGAATTT GGGTGATGTT GCTGTTGTCA TTGGTCGCGA CCCTGCTGAT GTTTGTGTTT GCCCTGCGCA ACATGGATAC GGTGCTGGTG CAGGAAAAAG AAGCGCGGCT GAATGCACTG ACAGATATCG CTATCAGCAT CATCACAGAC TTTCAGGGCA AGGCCCAATC CGGGGAGCTT AGCGAAGCCG ATGCCAAGGC AAAGGCGTTG TCCGCCCTGG ATAACCTCAG GTACTCGGGC AAAGAATACT ACTTCACCAT CGATAGACAG GGGATGATGA TCCAGCATCC CTTTGCCAAA AAATTGGTTG ATACCAATGT GTTGGGAATG GCTGATCCCA ACGGGGTGAA GTTGTTCGCC GAAATGATCC GCCTCACGCA AAACAGTGAT TCAGCTCTGG TCAATTACAT GTGGAATCAG CCAGACGCTG ACGCCCCCAG TCCTAAAATG AGTGTGGTAA AGCGCTTTAG TGAGTGGGGC TGGATAGTGG GCACAGGTAT TTATGTGGAT GATATTGCGG CCCAGAAACA GGAGTTTACC TGGCAATATT TGCTGGTGTT CCTGTTGGTG TGGGGGCCTG TGATGGCATT GTTGTTGATG ATAAGTCGCA GTGTGACCGA GCCTTTGCAG CGAACCCTGA TGGCTTTTAA AAACATTGCC GAAGGTGAGG CCAACCTGAC CTTGAGACTG GAGGAGCGCG GCCGCGATGA GCTATCACAG GTGTCGGTAT ACTTTAACGC CTTTGTTGGT CGTATTCAGT CACTGGTGAT CTCGGTGCGC GATTCGGTTG ACCACAGCCG GCAGTTATCT TCCTCGCTTT CGAATGTTGC CCACCAGGCG GCCCATGCCA CAAACAGCAT GCAACAGGAA ACCCAGAGTG TGGCAGCTGC TATCAATCAA ATGTCTGCCA CGGCCAGTGA AGTGGCGGCG AATGCCCAGC TTGCGGCAAA ATCGGCAAAA AATGCCGACA GCCAGGCTGA CAGTACCAAC CTGGTGGTAA CCCATGCCAT GGGCAATGTT CGGCAGCTAT CGAGCGAGCT GGAAGAGACC TCAGAGATCG CCAAGGCACT CAAAGTCAGC TCGGGTGAAA TCGGGCAAAT TCTCGATGTG ATAGTGGGCA TCGCCGAGCA GACGAATTTG CTGGCACTCA ATGCTGCCAT TGAGGCCGCC CGTGCAGGTG AGGCGGGGCG CGGTTTTGCT GTGGTTGCGG ATGAGGTCAG AACCCTGGCG AGCCGTACTC AACAATCCAC TCAGGAGATC AATGCCATCA TTGAAGCCAT TCGTGGCGCC GTCGACAAAG TCAATGCATC GGTTGCCAGA GCACGTCAGC AATCGGATAA TACGGTAGAT GAAACGGCAC AGGTGATGGA TGCCCTCGGC CTGATTAAAC AGGCCATAGG TCAGATAAAT GATATGAACC TGCAAATCGC AACCGCGACT GATGAACAGA GTGCCGTGAT TGCGGAGCTG AATGAAAATA TTAATAGAAT CAATGAGATT TCAGTAGAAA ACCTGTCCAA GAGTGAAACT GTTGGTCACA CCAGTGACCG GATTGCAGAA GACTCCAGGC AGATGGCGCA GTTGATCGCG GTATTTAAGG TGTAA
|
Protein sequence | MLSNIEVLML GHYLRNYNIS RRIWVMLLLS LVATLLMFVF ALRNMDTVLV QEKEARLNAL TDIAISIITD FQGKAQSGEL SEADAKAKAL SALDNLRYSG KEYYFTIDRQ GMMIQHPFAK KLVDTNVLGM ADPNGVKLFA EMIRLTQNSD SALVNYMWNQ PDADAPSPKM SVVKRFSEWG WIVGTGIYVD DIAAQKQEFT WQYLLVFLLV WGPVMALLLM ISRSVTEPLQ RTLMAFKNIA EGEANLTLRL EERGRDELSQ VSVYFNAFVG RIQSLVISVR DSVDHSRQLS SSLSNVAHQA AHATNSMQQE TQSVAAAINQ MSATASEVAA NAQLAAKSAK NADSQADSTN LVVTHAMGNV RQLSSELEET SEIAKALKVS SGEIGQILDV IVGIAEQTNL LALNAAIEAA RAGEAGRGFA VVADEVRTLA SRTQQSTQEI NAIIEAIRGA VDKVNASVAR ARQQSDNTVD ETAQVMDALG LIKQAIGQIN DMNLQIATAT DEQSAVIAEL NENINRINEI SVENLSKSET VGHTSDRIAE DSRQMAQLIA VFKV
|
| |