| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1030 |
|---|
| Symbol | |
|---|
| ID | 2685724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1109751 |
|---|
| End bp | 1111400 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637125700 |
|---|
| Product | methyl-accepting chemotaxis protein |
|---|
| Protein accession | NP_952084 |
|---|
| Protein GI | 39996133 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCA AGAGTTTCAA GGATTGGAGA ATACTGCCGA AGATCATCGG CGCGGCGCTC
CTCGGAGTGG CGCTCCTGGC GGCGGTAGTG CTCTTCTACT TCCTGCCCAT GGTCGAGAAG
CAGGAGATGG AAAGCCGCAA GCGTGCCACC AGACAATCGG TGGAGCTGGC CTTCGGCATC
GTGGGGGCCT ATGAGGCACG GATCGCGGCG GGAGAGCTGA CCGTTGACGA AGCAAAGGAG
CGGGCCGCTG CTGATATCAA AAAACTGCGC TACGCCAAAA AAGAGTACTT CTGGATCAAC
GACTCCAGCG CGCGTCTCGT GGCCCATCCC CTCAGGCCGG AAAACGAAGG AAAGGACATG
GGGGATTTCA AGGATGCCGA CGGCAAGCTG ATTTACCGCG AGTTCGCCAA GGCGGCCGGC
GCAGAAAACG GCGAGTTGTT CGTGGACTAC CGCCAGATCA AGCCCAACGA GAAGACGCCC
CTGCCGAAGG TTTCCTTTGT GAAGTACCAC AAGCCGTGGG ATTGGGTGAT CGGTACCGGC
ATCTACGTGG ACGACGTGAA GCGGGATATC ACCATGCTGC GCTGGAAGAT CATCGGCGCC
ATCGTTGTGG CCGGCGCGGT TGCCTGTCTG CTGGTTCTCT TTGCCGGGGT CAGGATTACC
CGCCCGCTCA AGGTCGTCGT GTCGAGCCTT GAGGATATTG CCCAAGGCGA AGGGGACCTG
ACCCGGCGGA TCGACGTGGT GACCCGGGAT GAGGTGGGCG ACCTGGGGCG TGCCTTCAAC
CAGTTCATCG AGAAGTTGCA CAACATCATT TCCCAGGTTG TCCAGAACAG CATGCAGGTG
GCGTCGGCCG CCGCCCAGAT TCACAGCACC TCCGAGCAGA CCGCAACGGG CGCCGAGGAG
GTTGCCGCTC AGGCCGGCAC CGTGGCCACG GCCGGCGAAG AAATGGCCAG CACTTCGTCG
GAGATCGCCC GCAACTGCAT GGCTGCCGCC GAAAACTCGC GCCAGGCCAA TGACACCGCC
CTCAAGGGCT CCCATGTGGT GAAGGAGACC CTGACGGTCA TGACCCGCAT CGCCGACCGG
GTCAAGGAGT CCGCCCATAC GGTCGAGTCC CTCGGGTCGC GCAGCGATCA GATCGGCGAG
ATCGTCGGTA CCATCCAGGA TATTGCCGAC CAGACCAACC TGCTGGCGCT TAACGCCGCC
ATCGAGGCGG CCCGGGCCGG CGAGCAGGGC CGGGGGTTCG CCGTGGTGGC CGACGAGGTG
CGGGCGCTGG CGGAGCGGAC CACCAAGGCC ACCAAGGAGA TCGGCCAGAT GATCCGGTCG
ATCCAGCAGG AGACAAAGCT GGCGGTCTCT TCCATGGAGG AAGGGGTCAA GGAAGTGGAG
AGGGGAACGT CAGAGGCCGC CAAATCGGGT GAGGCGCTGG AGGAAATCCT GCACCAGATC
GGCGAGGTGA CCAACCAGGT CAATCAGATC GCCACCGCCG CCGAGCAGCA GACAGCTACC
ACCAGCGAGA TCAGCAGCAA CATTCATGAG ATCACCGAAG TTATTACCCA GACAACCCGC
GGCGCCCAGG ACTCAGCCTC CGCCACCAGT GACCTGGCGC GTCTGGCCGA AGAACTTCAG
CGTTTGGTGG GACAATTCCG CCTCTCCTGA
|
|---|
| Protein sequence | MAIKSFKDWR ILPKIIGAAL LGVALLAAVV LFYFLPMVEK QEMESRKRAT RQSVELAFGI
VGAYEARIAA GELTVDEAKE RAAADIKKLR YAKKEYFWIN DSSARLVAHP LRPENEGKDM
GDFKDADGKL IYREFAKAAG AENGELFVDY RQIKPNEKTP LPKVSFVKYH KPWDWVIGTG
IYVDDVKRDI TMLRWKIIGA IVVAGAVACL LVLFAGVRIT RPLKVVVSSL EDIAQGEGDL
TRRIDVVTRD EVGDLGRAFN QFIEKLHNII SQVVQNSMQV ASAAAQIHST SEQTATGAEE
VAAQAGTVAT AGEEMASTSS EIARNCMAAA ENSRQANDTA LKGSHVVKET LTVMTRIADR
VKESAHTVES LGSRSDQIGE IVGTIQDIAD QTNLLALNAA IEAARAGEQG RGFAVVADEV
RALAERTTKA TKEIGQMIRS IQQETKLAVS SMEEGVKEVE RGTSEAAKSG EALEEILHQI
GEVTNQVNQI ATAAEQQTAT TSEISSNIHE ITEVITQTTR GAQDSASATS DLARLAEELQ
RLVGQFRLS
|
|---|
| |