More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_3699 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  68.75 
 
 
544 aa  713    Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  100 
 
 
543 aa  1095    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  92.45 
 
 
543 aa  999    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  68.57 
 
 
544 aa  709    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  76.2 
 
 
569 aa  823    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  69.3 
 
 
544 aa  690    Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  68.76 
 
 
544 aa  732    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  69.49 
 
 
544 aa  707    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  41.44 
 
 
556 aa  387  1e-106  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  40 
 
 
548 aa  382  1e-105  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  38.63 
 
 
545 aa  381  1e-104  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  37.87 
 
 
540 aa  355  1e-96  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  37.22 
 
 
549 aa  351  2e-95  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  35.6 
 
 
548 aa  345  2e-93  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
548 aa  339  8e-92  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  35.67 
 
 
554 aa  337  3.9999999999999995e-91  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  36.63 
 
 
549 aa  331  3e-89  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  35.79 
 
 
664 aa  330  4e-89  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  36.97 
 
 
564 aa  327  3e-88  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  35.65 
 
 
549 aa  325  9e-88  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.55 
 
 
546 aa  319  7e-86  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  33.21 
 
 
540 aa  316  8e-85  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  33.58 
 
 
566 aa  314  1.9999999999999998e-84  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  35.23 
 
 
548 aa  312  7.999999999999999e-84  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  32.26 
 
 
566 aa  307  3e-82  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  34.12 
 
 
544 aa  305  1.0000000000000001e-81  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  36.74 
 
 
546 aa  305  1.0000000000000001e-81  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  36.3 
 
 
559 aa  298  2e-79  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
560 aa  298  2e-79  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  35.81 
 
 
569 aa  297  3e-79  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  35 
 
 
541 aa  296  7e-79  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_009438  Sputcn32_0672  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
568 aa  296  7e-79  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  35.52 
 
 
558 aa  294  3e-78  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.5 
 
 
566 aa  288  2e-76  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  32.28 
 
 
570 aa  286  9e-76  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  33.93 
 
 
587 aa  282  1e-74  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  32.1 
 
 
545 aa  280  4e-74  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
585 aa  280  5e-74  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_008322  Shewmr7_1845  methyl-accepting chemotaxis sensory transducer  32.1 
 
 
545 aa  280  6e-74  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.73 
 
 
584 aa  280  7e-74  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  34.96 
 
 
584 aa  279  8e-74  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  36.64 
 
 
561 aa  279  1e-73  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  32.56 
 
 
553 aa  279  1e-73  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  33.15 
 
 
678 aa  278  2e-73  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_011662  Tmz1t_1371  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.09 
 
 
544 aa  276  8e-73  Thauera sp. MZ1T  Bacteria  normal  0.116754  n/a   
 
 
-
 
NC_009831  Ssed_2412  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
545 aa  273  4.0000000000000004e-72  Shewanella sediminis HAW-EB3  Bacteria  normal  0.516535  hitchhiker  0.00000653474 
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  31.98 
 
 
564 aa  273  8.000000000000001e-72  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  35.75 
 
 
561 aa  273  8.000000000000001e-72  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  35.17 
 
 
554 aa  272  1e-71  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  31.5 
 
 
519 aa  272  1e-71  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
533 aa  271  2e-71  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  32.67 
 
 
554 aa  271  2e-71  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.64 
 
 
533 aa  271  2.9999999999999997e-71  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
545 aa  270  2.9999999999999997e-71  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.17 
 
 
533 aa  270  2.9999999999999997e-71  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  35.15 
 
 
545 aa  271  2.9999999999999997e-71  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  35.15 
 
 
545 aa  270  4e-71  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.15 
 
 
545 aa  270  4e-71  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  35.15 
 
 
545 aa  270  4e-71  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  34.97 
 
 
554 aa  270  4e-71  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  33.15 
 
 
557 aa  270  5.9999999999999995e-71  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  34.97 
 
 
554 aa  269  8.999999999999999e-71  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  33.73 
 
 
554 aa  269  1e-70  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  31.55 
 
 
545 aa  269  1e-70  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.77 
 
 
554 aa  268  1e-70  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  32.38 
 
 
553 aa  269  1e-70  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  33.53 
 
 
554 aa  268  2e-70  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  35.54 
 
 
563 aa  268  2e-70  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  34.41 
 
 
533 aa  268  2.9999999999999995e-70  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4018  methyl-accepting chemotaxis sensory transducer  32.3 
 
 
713 aa  267  4e-70  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000208845  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  44.76 
 
 
712 aa  267  4e-70  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  35.78 
 
 
560 aa  267  4e-70  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
515 aa  267  4e-70  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_008576  Mmc1_2392  methyl-accepting chemotaxis sensory transducer  32.01 
 
 
787 aa  267  4e-70  Magnetococcus sp. MC-1  Bacteria  normal  0.467356  normal  0.0918963 
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  34.48 
 
 
536 aa  266  5e-70  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
554 aa  266  5e-70  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  44.76 
 
 
712 aa  265  2e-69  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  35.57 
 
 
554 aa  265  2e-69  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2492  methyl-accepting chemotaxis sensory transducer  31.15 
 
 
787 aa  265  2e-69  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000288595  normal  0.31948 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  32.67 
 
 
555 aa  265  2e-69  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
554 aa  264  3e-69  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  31.92 
 
 
545 aa  263  6.999999999999999e-69  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  31.63 
 
 
538 aa  262  1e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  32.42 
 
 
517 aa  260  4e-68  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  32.42 
 
 
517 aa  260  5.0000000000000005e-68  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  37.66 
 
 
713 aa  259  6e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  47.16 
 
 
637 aa  259  8e-68  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  33.54 
 
 
554 aa  259  9e-68  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  30.9 
 
 
585 aa  259  1e-67  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
554 aa  258  2e-67  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05646  histidine kinase  34.02 
 
 
482 aa  258  2e-67  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  31.99 
 
 
567 aa  256  1.0000000000000001e-66  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  34.55 
 
 
554 aa  256  1.0000000000000001e-66  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  34.24 
 
 
533 aa  254  2.0000000000000002e-66  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_010505  Mrad2831_1766  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
575 aa  254  2.0000000000000002e-66  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  33.89 
 
 
554 aa  255  2.0000000000000002e-66  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  32.12 
 
 
517 aa  254  4.0000000000000004e-66  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  32.63 
 
 
554 aa  253  5.000000000000001e-66  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  30.83 
 
 
519 aa  253  6e-66  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  32.63 
 
 
554 aa  253  7e-66  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
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