| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3380 |
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| Symbol | |
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| ID | 3970540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3759610 |
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| End bp | 3761313 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926492 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_533240 |
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| Protein GI | 90424870 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.689596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCA CGATGTCGAA TCGCTTCAGA CTGACGATCG GTCGCAAGAT CTACGCCCTC
ATCGGACTGG GCTTCGTCGG GCTGCTCGGC GTCACTTTTC TGGATTCCCG TGAGCTCGCG
TCCGGGTTGA AGATGCAGAA GCAGATCGAG CTGAAGCATT TGGCCGAATT GGCGCTCGCC
GTGGTCAAGG AAGAGCAGGC CATTGGCCAG GCCGGCGGCA TCGCCGTCGC CGAGGCGCAG
AAGCGGGCGC AGGCCCGGCT GGCCGGCCTG CGTTACGGCA ACAATGATTA CTTCTTCGTC
AGCGACCTGC AGAACCGCAT GGTGATGCAT CCGATCAGCC CGCAGCTGAA TGGGCAGGAT
GTCGGCGACA CCAAGGACGC CGACGGCAAG CAGTTGTTCG TCGAGATGAG CGACCTTGTC
CGTCGCGACG GCGGCGGATT TGTCGACTAT CAATGGGCCA AGCCGGGGGC GCAGAAGCCG
TCGCCGAAGC TGACCTATGT CATCGGGTTC GCGCCGTGGG GCTGGGTGAT CGGCACCGGG
GTGTATATCG ACGATCTCCA TGAACAGACC TGGACCGCGA CCCAGCGCTC GCTGATCGTC
GCGGCTTTGG TGGTGCTGAT CACGCTTGCG GTGTCGATCT TCATGGCCGG CCGGATCACC
AAGCCGTTGC ATCTGATGAC CGACGCGATG AAGGCGCTGG CGGGCGGCAA GCTCGACGTT
GCCGTGCCGG GGATCGGCCG CAGCGACGAA GTCGGCGAGA TGGCAGAGGC CGTCGAAGTG
TTCAAGACCA ATGCGGTGGC GCGGCAGCGG CTCGAGGCCG AGCAGCACGA GCTGGAGGCG
CGCGCCGCGG CGCAGCGCAA GGCCGATACC AACAAGCTCG CCGACGATTT CGAAGGCGCG
GTCGGCGAGA TCATCCACAC GGTTTCTTCG GCTTCGACCG AGCTGGAAGC ATCCGCCGCG
ACCCTGACCT CGACGGCCGA ACGCTCGCAG CAGCTCGCCA CCGTTGTGGC GGCGGCCTCC
GAGGAAGCCT CGACCAATGT CCAGTCGGTG GCCTCTGCGA CCGAGGAGAT GACTTCGTCG
GTCCATGAAA TCAGCCGTCA GGTGCAGGAT TCCGCCCGCA TCGCCCATGA GGCCGTCGAT
CAGGCGCGCA AAACCAACGA CCGGGTCGGC GAATTGTCCA AGGCCGCGGC GCGGATCGGC
GACGTCATCG AACTGATCAA CACCATCGCG GGGCAGACCA ATCTGCTGGC GCTGAACGCC
ACCATCGAAG CCGCACGCGC CGGCGAAGCG GGGCGCGGCT TTGCCGTGGT CGCCAGCGAG
GTCAAGGCGT TGGCCGAGCA GACCGCGAAA GCCACCGGCG AGATCGGCCA GCAGATCACC
GGGATTCAAG CCGCGACTGA GGATTCCGTC GCGGCGATCA AGGAGATCAG CGACACCATC
GGCAAGATGT CGGAGATCGC CTCGACCATC GCCTCGGCGG TGGAGCAGCA GGGCGCGGCC
ACCCAGGAGA TTTCCCGCAA CGTACAACAG GCCGCGCAGG GCACCCAGCA GGTCTCGGCC
AACATCAGCG ACGTGCAACG CGGCGCCAGC GAGACCGGAT CGGCCTCGTC CGAAGTGCTC
TCGGCGGCGC AGTCGCTGTC GCGCGACAGC AATCGGCTGC AGGACGAGGT CAGCCGATTC
CTCCGCACCG TCCGCGCCGC CTGA
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| Protein sequence | MATTMSNRFR LTIGRKIYAL IGLGFVGLLG VTFLDSRELA SGLKMQKQIE LKHLAELALA
VVKEEQAIGQ AGGIAVAEAQ KRAQARLAGL RYGNNDYFFV SDLQNRMVMH PISPQLNGQD
VGDTKDADGK QLFVEMSDLV RRDGGGFVDY QWAKPGAQKP SPKLTYVIGF APWGWVIGTG
VYIDDLHEQT WTATQRSLIV AALVVLITLA VSIFMAGRIT KPLHLMTDAM KALAGGKLDV
AVPGIGRSDE VGEMAEAVEV FKTNAVARQR LEAEQHELEA RAAAQRKADT NKLADDFEGA
VGEIIHTVSS ASTELEASAA TLTSTAERSQ QLATVVAAAS EEASTNVQSV ASATEEMTSS
VHEISRQVQD SARIAHEAVD QARKTNDRVG ELSKAAARIG DVIELINTIA GQTNLLALNA
TIEAARAGEA GRGFAVVASE VKALAEQTAK ATGEIGQQIT GIQAATEDSV AAIKEISDTI
GKMSEIASTI ASAVEQQGAA TQEISRNVQQ AAQGTQQVSA NISDVQRGAS ETGSASSEVL
SAAQSLSRDS NRLQDEVSRF LRTVRAA
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