| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05691 |
|---|
| Symbol | |
|---|
| ID | 5557700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 895486 |
|---|
| End bp | 897102 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640910166 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001447813 |
|---|
| Protein GI | 156976907 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTA GTAACCTATC CGTTAGAAAC AAGCTGCTTG CGCTTGTTAT TTTCTCTGCA
TTCCTTCTGA TTGCGGCTTG CTTATACAAC TTAAATGAAC AACGTAAAAA CTCGTTAAGC
GAACGAGAGA GCAAACTCAG TGCGCTAGTT GAAGTTGCCA TTAGCTTGAT TGACCATTAC
TACCAGCAGC GAAGTGAGTT GGGGGTTGAG GATGCAAAAC AACAAGCGCT GAATGCGATC
CAAACATTGC GCTATGACAG CAACAACTAC TTCTGGGTAC TGACGCCTGA ACTCAAAGTC
TTGCTTCATC CGACTAAGCC TGATCTCAAC GGTGCGGATG CGAGCAACTT TAAAGATGGT
GCAGGTAAGT TCCACTGGCG TGAAATGGCT CAGATAGCCA AAACTACGCG CTCAGGCTTT
TTGGATTACC ACTGGAAAAG CCCAGAAGGG AAATTGAAAG ATAAGATCTC CTACGTACAA
ATCTACCCTG AGTGGCAATG GATCGTTGGT TCAGGCATCC TTGTTGCCGA TATTCAAGAA
GCCTTTTACA AAGAAGCGGT CAAAGAGGCA ATCATCGCTA CGGTATTAAT TGGTGCGCTA
GCGGTTCTCG GTTACATCAT TTCAAGTAAC ATCATCGATC CTCTTCAAAG ACTGATCAGC
AACACCCACA AAATTGCCGA TGGTGATCTC ACTGTGCGCC TAAATGCATC TCGTAAAGAT
GAGCTGGGTG AGATGAGTAA CGAGATTGAC CGTATGCTAG AAAAGCTACA AGGGACTTTA
CTCGCGGCCC ATGAATCTGC GCAGCAGTCT GCCAATATGG CACAAAGCAT TGCACAAGCA
AGTGAAGAGG CTGCGACCAG TGTAAACAGT CAGCATGCAC AATTAGAGCA ACTTTCAACA
GCAATGACGG AAATGAGTAC CACTATTTCA GATGTCGCCA ACAATGCAGA GAATACAGCG
CACAGCACGG CACTTGTAAC CAATCATGCC GAGCAAAGCG GGAAAGACAT GCAGCAAACC
TCTCAAACCA TTGCTGAAGT CTCTCAAGAC ATCGCTGCTG CGGACCAGAT GGTCGCAGAG
CTTCAAGCGG GTGTGAATGA AATCCGAGCG GTTGTGAGTG TGATTCGAGA AGTTTCTGAG
CAAACAAACT TGCTTGCTTT AAATGCAGCG ATTGAAGCAG CACGGGCAGG TGAGCAGGGC
CGTGGATTTG CCGTTGTTGC CGATGAGGTA CGAAACCTTG CGAGTCGCAC ACAACAATCG
ACCGACGAAG TTCAACAGAC CATCGATTCA CTGATTGAGC GTACGGAGCG TACCGTCAAA
GCGATGGAGC GCAGCAATGC AAAAGTGGAG CAGAGTGTCG GAATATCACA ATCTACGCAA
ACGCAATTAG AAACCATGGT TGAGGAGTTG ATACGTTCGA ATGATATGGT GGCTCAGATT
GCCGCAGCGT CAGAGCAGCA AGGCTTAGTG GCGAACGAGA TGACACAAAA TGTTACGACC
ATTCACCTAG CGGCAAATGA AGTGAAAGAA GCGTCGCAAA TGCTTGCAGA GGAAAGCCAG
CACTTAGCGG CAACCTCAGA GATTCTTCAT GATCAACTTA GATACTTTAA AGTCTAA
|
|---|
| Protein sequence | MKLSNLSVRN KLLALVIFSA FLLIAACLYN LNEQRKNSLS ERESKLSALV EVAISLIDHY
YQQRSELGVE DAKQQALNAI QTLRYDSNNY FWVLTPELKV LLHPTKPDLN GADASNFKDG
AGKFHWREMA QIAKTTRSGF LDYHWKSPEG KLKDKISYVQ IYPEWQWIVG SGILVADIQE
AFYKEAVKEA IIATVLIGAL AVLGYIISSN IIDPLQRLIS NTHKIADGDL TVRLNASRKD
ELGEMSNEID RMLEKLQGTL LAAHESAQQS ANMAQSIAQA SEEAATSVNS QHAQLEQLST
AMTEMSTTIS DVANNAENTA HSTALVTNHA EQSGKDMQQT SQTIAEVSQD IAAADQMVAE
LQAGVNEIRA VVSVIREVSE QTNLLALNAA IEAARAGEQG RGFAVVADEV RNLASRTQQS
TDEVQQTIDS LIERTERTVK AMERSNAKVE QSVGISQSTQ TQLETMVEEL IRSNDMVAQI
AAASEQQGLV ANEMTQNVTT IHLAANEVKE ASQMLAEESQ HLAATSEILH DQLRYFKV
|
|---|
| |