| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2119 |
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| Symbol | |
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| ID | 4923485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2454694 |
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| End bp | 2456340 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163704 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001094244 |
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| Protein GI | 127513047 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA TTTACGCCCT GTTTCGCAAG TTTAAAATTG CCCATCGTTT ACTGTTTATG
TTGCTGCTTG CCATCGTCGC GACCGGTATC ATGTTTGTGT TTGCGCTGGC AAATATCGAA
GAGGTCTTGG TTAAGGAGAA ACAGGCCAAG TTATCGGCCC TGTCCGATGT TGGCGAGAAG
GTGATCAGCC AGTTTTATGA GGCGTCACAA GCTGGCAGCA TGAGTGAGGA AGAGGCCAAA
CGCAACGCCA TCGCTGCCCT GGATGCCCTG AGGTATGAGG GTAACGAATA TTTCTGGACC
ATAGATAGGC AGGGGATCAT GGTGCAGCAT GCCTTCGCCA AGAAGTTGGT GGGCACCAAT
GTGTTGGGGA TGAAAGATCC CAATGGCGTC AGGCTATTCG AGAAGATGGT GACAGGTACG
GCAAATAGCG ATTATGCGCT GATCGAATAT ATGTGGAATC GCCCCAATGC TTCGGCGCCG
AGCCCTAAGA TGAGTGTGGT CAAACGCTTT ACTCCCTGGG GATGGATAGT CGGCACCGGC
ATCTATGTAG ATGATATCCA AGAGGAGATG CAGGCCTTCA TCTACAAGTA TCTGCTGATC
TGCATTGCGG TGTGGCTGCC GGTGATCCTG ATCTTAGGGG TGATTTCCCG CAGTATCTCG
GCGCCTATGG CCGACACCAT AGCCGCCTTC GAAAATATCG CTCGCGGCGA AGGCGATCTT
ACTCTGAGGC TCGAAGAGTC GGGCCGGGAT GAACTCAAAC AGGTGGCGGC GAGCTTTAAT
GAATTCGTTG CCAAGATACA GGCGCTGGTT AATTCGGTGA GCGCCTCTGT GACCCACAGC
CGCGAACTGG CCGAAGGCCT GGCGGATATC TCGGCCCAGG CCAGTATGGT GACGGCCAAC
ATGCAGGCGG AGACCCAAAG TGTCGCCACC GCCATCAATG AGATGTCCAT GGCTTCCTCC
GAGGTGGCGT CCAATGCCCA GCTAGCGGCC GATAGTGCCG GCAGCGCCGA TGGCGAAGCC
GATGATACAG TGGCCGTGGT CGATGGCGCC GTAGCTAAGA TAAAAGGCCT GTCTAACGAG
TTAGAGGTGA CTGCCGATGA GGCTCAGGCG CTGCAGATAA GTTCAGGCAA GATAGGGCAG
ATCTTGGATG TGATCGTTGG CATCGCCGAG CAGACTAATC TGCTGGCGCT AAACGCGGCC
ATCGAGGCGG CGAGAGCCGG CGAGGCCGGG CGCGGCTTTG CGGTGGTGGC CGATGAGGTG
CGCACCCTGG CCAGTCGAAC TCAGGAATCG ACCCAGGAGA TCAATGCCAT CATAGAGGCT
ATCCGCGCCT CGGTAGACAG TGTCAACGCT TCGGTGGCCA GGGCCAAGGC GCAGTCGGAG
CAGACGGTAG GTGAAACCAG TCAGGTGGTG GAGGCGCTGC AGACCATCAA GTCTTCCATC
AGACAGATCT CCGACATGAA TATCCAGATC GCCACTGCGA CCGAGGAGCA GAGTGCGGTG
ATCGCCGAGC TGAATATGAA TGTGACCCGG ATTAACGATA TTTCACTGGA GAATCAGCAG
AAGAGTGAAG AGATTGGCAG TACCAGTGAG CAGATAAAAT CGGGCTCGGC GGATCTTGAA
TCCCTTATTT CGACCTTTAA GCTGTAA
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| Protein sequence | MNAIYALFRK FKIAHRLLFM LLLAIVATGI MFVFALANIE EVLVKEKQAK LSALSDVGEK
VISQFYEASQ AGSMSEEEAK RNAIAALDAL RYEGNEYFWT IDRQGIMVQH AFAKKLVGTN
VLGMKDPNGV RLFEKMVTGT ANSDYALIEY MWNRPNASAP SPKMSVVKRF TPWGWIVGTG
IYVDDIQEEM QAFIYKYLLI CIAVWLPVIL ILGVISRSIS APMADTIAAF ENIARGEGDL
TLRLEESGRD ELKQVAASFN EFVAKIQALV NSVSASVTHS RELAEGLADI SAQASMVTAN
MQAETQSVAT AINEMSMASS EVASNAQLAA DSAGSADGEA DDTVAVVDGA VAKIKGLSNE
LEVTADEAQA LQISSGKIGQ ILDVIVGIAE QTNLLALNAA IEAARAGEAG RGFAVVADEV
RTLASRTQES TQEINAIIEA IRASVDSVNA SVARAKAQSE QTVGETSQVV EALQTIKSSI
RQISDMNIQI ATATEEQSAV IAELNMNVTR INDISLENQQ KSEEIGSTSE QIKSGSADLE
SLISTFKL
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