More than 300 homologs were found in PanDaTox collection
for query gene VC0395_A2596 on replicon NC_009457
Organism: Vibrio cholerae O395



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  68.65 
 
 
557 aa  751    Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  100 
 
 
564 aa  1144    Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  43.37 
 
 
558 aa  449  1e-125  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
554 aa  437  1e-121  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  43.95 
 
 
568 aa  432  1e-120  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  44.01 
 
 
554 aa  430  1e-119  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.95 
 
 
554 aa  431  1e-119  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  43.74 
 
 
554 aa  429  1e-119  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  43.2 
 
 
554 aa  429  1e-119  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  44.42 
 
 
554 aa  431  1e-119  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  43.76 
 
 
554 aa  430  1e-119  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  43.48 
 
 
554 aa  426  1e-118  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  43.39 
 
 
554 aa  426  1e-118  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
554 aa  427  1e-118  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  43.74 
 
 
554 aa  428  1e-118  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  44.24 
 
 
554 aa  427  1e-118  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  43.58 
 
 
554 aa  426  1e-118  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  43.74 
 
 
554 aa  427  1e-118  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  43.76 
 
 
554 aa  427  1e-118  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.39 
 
 
554 aa  424  1e-117  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  43.39 
 
 
554 aa  425  1e-117  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
554 aa  424  1e-117  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  42.16 
 
 
554 aa  419  1e-116  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  40.81 
 
 
555 aa  410  1e-113  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
554 aa  405  1e-111  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
564 aa  391  1e-107  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  38.27 
 
 
559 aa  369  1e-101  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  36.45 
 
 
553 aa  336  5e-91  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  38.75 
 
 
560 aa  331  2e-89  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  36.09 
 
 
553 aa  330  3e-89  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
560 aa  327  4.0000000000000003e-88  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  36.72 
 
 
561 aa  326  8.000000000000001e-88  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  36.57 
 
 
561 aa  324  3e-87  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  39.96 
 
 
548 aa  323  5e-87  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  35.09 
 
 
554 aa  295  1e-78  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_009456  VC0395_0122  methyl-accepting chemotaxis protein  35.55 
 
 
553 aa  293  4e-78  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
548 aa  293  7e-78  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II0756  methyl-accepting chemotaxis protein  33.04 
 
 
558 aa  290  5.0000000000000004e-77  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  35.78 
 
 
548 aa  285  1.0000000000000001e-75  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_008228  Patl_0520  methyl-accepting chemotaxis sensory transducer  34.72 
 
 
561 aa  284  3.0000000000000004e-75  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.859036  n/a   
 
 
-
 
NC_009831  Ssed_2783  methyl-accepting chemotaxisprotein  34.32 
 
 
690 aa  283  5.000000000000001e-75  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.468562 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  33.75 
 
 
549 aa  274  3e-72  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  36.23 
 
 
544 aa  274  4.0000000000000004e-72  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  33.22 
 
 
558 aa  272  1e-71  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  33.93 
 
 
549 aa  268  1e-70  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  32.79 
 
 
545 aa  268  1e-70  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  32.28 
 
 
548 aa  268  2e-70  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  32.76 
 
 
556 aa  265  2e-69  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  32.93 
 
 
569 aa  264  3e-69  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  32.69 
 
 
543 aa  260  6e-68  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  33.2 
 
 
549 aa  259  8e-68  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.96 
 
 
546 aa  259  1e-67  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  31.5 
 
 
544 aa  258  3e-67  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4216  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
647 aa  256  9e-67  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1498  methyl-accepting chemotaxis sensory transducer  37.09 
 
 
687 aa  254  2.0000000000000002e-66  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000111484  normal 
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
584 aa  253  6e-66  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  32.85 
 
 
544 aa  253  9.000000000000001e-66  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  32.78 
 
 
544 aa  251  2e-65  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_004578  PSPTO_3237  methyl-accepting chemotaxis protein  42.45 
 
 
771 aa  251  2e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  33.2 
 
 
544 aa  251  2e-65  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  32.25 
 
 
546 aa  251  3e-65  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2544  methyl-accepting chemotaxis sensory transducer  40.95 
 
 
633 aa  249  6e-65  Shewanella baltica OS185  Bacteria  hitchhiker  0.00517521  n/a   
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  38.37 
 
 
632 aa  249  8e-65  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.55 
 
 
713 aa  248  2e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  40.68 
 
 
643 aa  248  2e-64  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  34.51 
 
 
543 aa  246  8e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  31.35 
 
 
570 aa  246  9.999999999999999e-64  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
533 aa  245  1.9999999999999999e-63  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  33.59 
 
 
569 aa  242  1e-62  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.47 
 
 
623 aa  241  2e-62  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009783  VIBHAR_02418  hypothetical protein  31.31 
 
 
578 aa  241  2e-62  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  31.46 
 
 
533 aa  240  4e-62  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  32.3 
 
 
533 aa  238  2e-61  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.3 
 
 
533 aa  238  2e-61  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_008322  Shewmr7_1845  methyl-accepting chemotaxis sensory transducer  31.4 
 
 
545 aa  238  2e-61  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  31.23 
 
 
545 aa  236  6e-61  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
NC_003910  CPS_3839  methyl-accepting chemotaxis protein  40.3 
 
 
636 aa  236  1.0000000000000001e-60  Colwellia psychrerythraea 34H  Bacteria  normal  0.406017  n/a   
 
 
-
 
NC_009092  Shew_3044  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
688 aa  236  1.0000000000000001e-60  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  41.97 
 
 
712 aa  235  2.0000000000000002e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  31.14 
 
 
565 aa  235  2.0000000000000002e-60  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  38.73 
 
 
638 aa  235  2.0000000000000002e-60  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  40.16 
 
 
712 aa  234  4.0000000000000004e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009654  Mmwyl1_3346  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
557 aa  233  5e-60  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.418138 
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  32.3 
 
 
536 aa  233  5e-60  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  30.8 
 
 
566 aa  233  6e-60  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  32.37 
 
 
540 aa  233  7.000000000000001e-60  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  40.05 
 
 
712 aa  233  8.000000000000001e-60  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_010506  Swoo_1310  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
497 aa  233  9e-60  Shewanella woodyi ATCC 51908  Bacteria  normal  0.615607  normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  40.51 
 
 
540 aa  233  1e-59  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  32.63 
 
 
545 aa  231  2e-59  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0113  chemotaxis sensory transducer  34.38 
 
 
563 aa  231  2e-59  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  30.21 
 
 
538 aa  231  2e-59  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  31.57 
 
 
540 aa  232  2e-59  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_003910  CPS_1267  methyl-accepting chemotaxis protein  30.51 
 
 
557 aa  231  3e-59  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  33.46 
 
 
545 aa  231  4e-59  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
636 aa  231  4e-59  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  33.19 
 
 
545 aa  231  4e-59  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  39.54 
 
 
716 aa  230  5e-59  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  33.26 
 
 
545 aa  230  5e-59  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4711  methyl-accepting chemotaxis protein  38.24 
 
 
633 aa  230  6e-59  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>