More than 300 homologs were found in PanDaTox collection
for query gene Swoo_1310 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011663  Sbal223_3213  methyl-accepting chemotaxis sensory transducer  66.87 
 
 
495 aa  651    Shewanella baltica OS223  Bacteria  normal  0.023485  normal 
 
 
-
 
NC_009665  Shew185_1142  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
495 aa  650    Shewanella baltica OS185  Bacteria  normal  0.0413666  n/a   
 
 
-
 
NC_008577  Shewana3_3116  methyl-accepting chemotaxis sensory transducer  67.27 
 
 
495 aa  656    Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00299178  normal 
 
 
-
 
NC_009052  Sbal_1082  methyl-accepting chemotaxis sensory transducer  66.87 
 
 
495 aa  653    Shewanella baltica OS155  Bacteria  hitchhiker  0.000101058  n/a   
 
 
-
 
NC_009997  Sbal195_1176  methyl-accepting chemotaxis sensory transducer  67.07 
 
 
495 aa  655    Shewanella baltica OS195  Bacteria  hitchhiker  0.00652986  normal 
 
 
-
 
NC_008321  Shewmr4_2937  methyl-accepting chemotaxis sensory transducer  67.47 
 
 
495 aa  661    Shewanella sp. MR-4  Bacteria  hitchhiker  0.000865197  normal  0.384283 
 
 
-
 
NC_010506  Swoo_1310  methyl-accepting chemotaxis sensory transducer  100 
 
 
497 aa  991    Shewanella woodyi ATCC 51908  Bacteria  normal  0.615607  normal 
 
 
-
 
NC_008322  Shewmr7_3019  methyl-accepting chemotaxis sensory transducer  67.47 
 
 
495 aa  657    Shewanella sp. MR-7  Bacteria  decreased coverage  0.00108184  normal 
 
 
-
 
NC_008700  Sama_0942  putative methyl-accepting chemotaxis sensory transducer  61.34 
 
 
495 aa  551  1e-156  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.000202207  normal 
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
499 aa  255  1.0000000000000001e-66  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  41.82 
 
 
716 aa  246  6.999999999999999e-64  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  39.44 
 
 
712 aa  243  7.999999999999999e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  39.15 
 
 
712 aa  242  1e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  40 
 
 
713 aa  236  5.0000000000000005e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  39.84 
 
 
557 aa  234  2.0000000000000002e-60  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
638 aa  234  4.0000000000000004e-60  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  40.23 
 
 
564 aa  233  8.000000000000001e-60  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  41.16 
 
 
545 aa  231  2e-59  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  38.8 
 
 
554 aa  230  5e-59  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  32.38 
 
 
554 aa  229  6e-59  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  39.05 
 
 
564 aa  230  6e-59  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  37.57 
 
 
634 aa  229  9e-59  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  39.01 
 
 
554 aa  229  1e-58  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
554 aa  228  2e-58  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  40.79 
 
 
545 aa  228  2e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
554 aa  227  4e-58  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
634 aa  227  4e-58  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  40 
 
 
554 aa  227  5.0000000000000005e-58  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  39.61 
 
 
554 aa  226  8e-58  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  38.8 
 
 
554 aa  225  1e-57  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  39.94 
 
 
546 aa  224  2e-57  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  38.8 
 
 
554 aa  224  2e-57  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  37.04 
 
 
541 aa  224  2e-57  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  39.31 
 
 
560 aa  224  3e-57  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  39.82 
 
 
554 aa  224  3e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  40.53 
 
 
554 aa  223  4.9999999999999996e-57  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.52 
 
 
554 aa  223  6e-57  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  39.45 
 
 
554 aa  222  9.999999999999999e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
554 aa  222  9.999999999999999e-57  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
554 aa  222  9.999999999999999e-57  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  39.41 
 
 
545 aa  221  1.9999999999999999e-56  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  38.11 
 
 
632 aa  221  3e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  38.06 
 
 
629 aa  221  3e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  40.41 
 
 
554 aa  219  6e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
554 aa  219  7.999999999999999e-56  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  39.2 
 
 
559 aa  219  1e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  39.09 
 
 
634 aa  219  1e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  33.26 
 
 
548 aa  218  1e-55  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  37.78 
 
 
650 aa  219  1e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  37.78 
 
 
629 aa  218  1e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  38.57 
 
 
558 aa  218  1e-55  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
638 aa  219  1e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  37.57 
 
 
638 aa  218  2e-55  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  37.82 
 
 
632 aa  218  2e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_009656  PSPA7_2234  putative chemotaxis transducer  40.48 
 
 
545 aa  218  2.9999999999999998e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  37.29 
 
 
555 aa  216  5e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
554 aa  217  5e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
630 aa  216  5.9999999999999996e-55  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
568 aa  216  9e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
554 aa  215  9.999999999999999e-55  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
568 aa  215  9.999999999999999e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  31.7 
 
 
497 aa  215  9.999999999999999e-55  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  37.4 
 
 
638 aa  214  1.9999999999999998e-54  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.55 
 
 
624 aa  214  1.9999999999999998e-54  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
541 aa  215  1.9999999999999998e-54  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.41 
 
 
554 aa  214  2.9999999999999995e-54  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  37.8 
 
 
560 aa  213  4.9999999999999996e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  39.39 
 
 
561 aa  212  2e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  38.62 
 
 
629 aa  211  3e-53  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  39.39 
 
 
561 aa  211  3e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.54 
 
 
630 aa  210  4e-53  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
636 aa  210  4e-53  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  36.09 
 
 
626 aa  210  6e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
638 aa  209  6e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  38.81 
 
 
629 aa  209  8e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2412  methyl-accepting chemotaxis sensory transducer  39.32 
 
 
545 aa  208  2e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  0.516535  hitchhiker  0.00000653474 
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  34.68 
 
 
632 aa  207  4e-52  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  35.88 
 
 
638 aa  206  5e-52  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  36.39 
 
 
630 aa  206  6e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  38.71 
 
 
545 aa  206  6e-52  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  36.21 
 
 
702 aa  206  7e-52  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  37.65 
 
 
624 aa  206  1e-51  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  37.46 
 
 
625 aa  205  1e-51  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  38.1 
 
 
629 aa  204  2e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  38.97 
 
 
629 aa  204  2e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  36.02 
 
 
637 aa  204  2e-51  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  37.35 
 
 
624 aa  203  5e-51  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  34.63 
 
 
628 aa  203  6e-51  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  37.04 
 
 
411 aa  203  6e-51  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  37.36 
 
 
623 aa  203  6e-51  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
631 aa  203  7e-51  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  38.02 
 
 
629 aa  203  7e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  35.26 
 
 
643 aa  202  8e-51  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.63 
 
 
628 aa  202  8e-51  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  36.72 
 
 
637 aa  202  9e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.12 
 
 
626 aa  202  9e-51  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  38.99 
 
 
640 aa  202  9.999999999999999e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  40.75 
 
 
636 aa  202  9.999999999999999e-51  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.35 
 
 
624 aa  202  9.999999999999999e-51  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  35.07 
 
 
578 aa  201  1.9999999999999998e-50  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
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