| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2880 |
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| Symbol | |
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| ID | 4605127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3420502 |
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| End bp | 3422178 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782291 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_928752 |
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| Protein GI | 119776012 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATAT CCATGTCTAA TTACAGTCTG AGAAACAAAC TTTTGCTGCT GGCCATGGTG
CCTTTGGTGC TGATCCTTAC TGCCGTGATG AGCTATTCCT GGCAGGTTGA GAGCCAGGCG
TTGGACGATT CGGTTGCCCT GTTTAAGGAA AAGCTGGTCA ATGAGCGGCA ACAGCAGCTC
CAGGAGGCCA CCCAGATTGC CCTTGCCGTG GTCGACCACC AGATAAGCCT GGGGCAAAAC
GGCAACATCA ATGATGCCCT GCGGCCACTG AGATTTGGCA GCGCCGGTTA CTTTTTTATC
TATGACTATC AGGGTGCCAA CGTGTTCCAC GCCACCAATC CGGCATTGGA AGGTACACCG
CAAATCGGCA TGACAGATCC CCAAGGCACC AAGATTGTGG TGGGGCTTAT TGATGCAGCC
AAACGTGGCG GCGGCTTTTT TAACTACGTG TATCCCAAAC CCGGTGTCGA GGGGTTGGTG
GATAAAATTG GGTATGCGGC TCCCATCCCC GGAAAAGATT GGCTATTGGG CACAGGCGCC
TATCTGGATG ATATAGACGC CGCGGTTGAC ACTTATTCAC AAAGTGCCCG TCAGGCCATG
TGGGAAAAAG CCGTGGCCAT TTTCATGATG TCGCTGGTGC TTGCCTTTAT CACCCTGATA
GCCATTTGGA GCGCCGCCCA CAGGATGGTG AAGCCCATTC GTGCCATGGT CGACAGCCTG
AACGACATCG CCAAGGGAGA AGGGGATCTT ACGGCGCGCC TCAGCGTTCG TGGTGAGGAT
GAAATCGCTG AGCTCGGCAT CGCCTTTAAC CAATTCGTGG ACAAGCTGCA GGGTATTATC
CGCGATGTGG CCGATACCAC GGGCCGGGTA AAACAGGCGG CCGTCGATAT TGACCGCCAA
ACTTCGGAGA TGGCGAATCA GCTTAACAGT CACAATAACG AAACCGATCA GGTGGTTACC
GCCATCACTG AGATGTCGTC CACTGCCGCC GAGGTGGCAC AAAATACCAC CCAGGTGGCC
GAAGCCACTC AGGCAGCCAC TGGTGATGTC GCCAAAGCCC AGGCCTGTGT TGATACCTCG
CTGGCAGAGA TTTCGAACCT GATGTCACAG GTTAACGACG CGGCGGCCAA TATTCAGTCC
CTCAGCGAAC AGTCGCAAAA GATTAATTCG GTGTTGTCTG TGATTGGTGG CATTGCCGAG
CAAACCAACT TGCTGGCGCT CAATGCGGCC ATTGAGGCCG CACGGGCCGG AGAACAGGGC
CGGGGCTTTG CGGTGGTGGC CGACGAAGTG CGTAATCTTG CCAGTCGGAC CCAGGCAAGT
ACTCTGGAAA TCAATGAAAT GCTTACCGAC TTGCACCGCC TGGTGTCATC TGCCGTGAAA
ACCATGGATG AGAGCCAGCA CAGTTGTCAG CGGTCTGTGG AAGCCTCGAC AGCGATTTCT
GAGAGTCTGG GATCGGTGAC CAGCGCCGTT ACCGCTATCA ATGATATGAG CACCCAGATT
GCGGCGGCGG CCACCGAGCA AAGCTCTGTG ACCGAAGAGA TTAACCGTAA TGTGTATGCC
ATTCAGGAGA TAGTGAATGC GTTGCTGGTC TCCAGTCAGG AGGCAAGAAC CGTCAGCCGC
ACCGTCTCCA CCGAAGGGGC CCAGCTCTCC AACCTGGTAG GCCAGTTCAA GGTGTGA
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| Protein sequence | MSISMSNYSL RNKLLLLAMV PLVLILTAVM SYSWQVESQA LDDSVALFKE KLVNERQQQL
QEATQIALAV VDHQISLGQN GNINDALRPL RFGSAGYFFI YDYQGANVFH ATNPALEGTP
QIGMTDPQGT KIVVGLIDAA KRGGGFFNYV YPKPGVEGLV DKIGYAAPIP GKDWLLGTGA
YLDDIDAAVD TYSQSARQAM WEKAVAIFMM SLVLAFITLI AIWSAAHRMV KPIRAMVDSL
NDIAKGEGDL TARLSVRGED EIAELGIAFN QFVDKLQGII RDVADTTGRV KQAAVDIDRQ
TSEMANQLNS HNNETDQVVT AITEMSSTAA EVAQNTTQVA EATQAATGDV AKAQACVDTS
LAEISNLMSQ VNDAAANIQS LSEQSQKINS VLSVIGGIAE QTNLLALNAA IEAARAGEQG
RGFAVVADEV RNLASRTQAS TLEINEMLTD LHRLVSSAVK TMDESQHSCQ RSVEASTAIS
ESLGSVTSAV TAINDMSTQI AAAATEQSSV TEEINRNVYA IQEIVNALLV SSQEARTVSR
TVSTEGAQLS NLVGQFKV
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