| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03718 |
|---|
| Symbol | |
|---|
| ID | 6778113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 4018058 |
|---|
| End bp | 4019680 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642757171 |
|---|
| Product | putative chemotaxis sensory protein |
|---|
| Protein accession | YP_002128004 |
|---|
| Protein GI | 196158515 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTTAA GAAAATTCAG TTTGATTCAA CGTTTGGGCA TTATAGCTGC TCTTATTACC
CTGCTATTTG TCTTGCTTAC TGCACTTGTT TTGAACAGGC ACTACGAGGC ATTAAAACAA
AAGTCTTACG ATGAAAATCA GCACCTTGTT GAAGTTGTGC ATACCTTATT AGGGAGTTTT
GCTAAGCGCG ACGATGTAGA CGAAGCTACG GCCAAACAGT TAGCACTTGA GGCGGTTAAA
GCGCTTAGAT ACGACGGCAA CAACTATTTT TGGATTCAGG ATGAAACCCC TGCCATGGTA
ATGCATCCGA TGAAGCCTGC TCTTGATGGC AAAGACCTTA GAACCTTTAA AGATGGTAAT
GGCAGAGCGT TTTTTCTTGA AATGGCGCAA AAAGTAAAAG CTAAAGGAGC AGGCTTTGTC
GACTATGTTT GGCCTCTTCC TGGCGAAGAA GCCCCAACCG ATAAGATTTC TTATGTAAAA
GCATTTAAAC CATGGGGGTG GACAGTAGGC TCAGGTATTT ACCTTACCAA TCTTGAAGAA
GAATATGCCC ACCTGCGCAA TGTTATCGTG GTGTTTTGTG TGGTAAGCGT AGTTTTAGTC
ATTCTGCTTA TCTACGTAAT TGGCGGCAGT ATCGTTAAGC CGGTTCAGGA AGTCAGTGAG
CGCATGAAAG ATATTTCCCA AGGTGAGGGC GATCTTACCC GCTCATTACC GGAAACAGGG
CAAGATGAAG TGACGCGCTT GGCGCGCTAT TTCAACGAGT ACACCGAGAA GATGCGTCAA
TCTTTATTGG GTATTCGGGA AAATATTAAT TCCCTTACCC AACAGGCTGA GCTGGTAGAA
ACTTCCAGTA AAAACAGTAA CGCGCGGGCG CAAACGCAAA ATGAGAACAT GCTTCAAGTT
GCCGCAGCGA TGGAAGAAAT GACCACGCAA ATTAACGAGG TAAGCAATAA CGCTGACTCT
GCTGAAAAAG GCACCAGTAG TGCAAGAAGT AACGTGCAGC ACGGTGCGTC TGTGGTAGAT
AGTACAGTTC AAGATATTCG CTCATTAACA TCTGATATTG AAAGTGTGAG TAACGTGGTG
ACCGAGCTTG CCGCACAGAC AGACAGTATT GGCGCTGTAC TTGACGTTAT CCGCGGTATT
GCAGAACAAA CCAACTTGCT TGCACTTAAT GCCGCCATTG AAGCTGCGCG GGCCGGGGAG
CAAGGCCGAG GTTTCGCAGT CGTTGCCGAT GAAGTGCGAA CGCTAGCAAG CAGAACGGGA
CAAAGTACCG ATGAAATACA GGCCATGATT GAGAAACTGC AGAGCAATGC GAAAAATGCC
GTGGATGCGG TAAAAGTGAG TCAGGCTGCG TCGTCTAAAA CCGTAGATAA CGCCATACAA
GCAAACCAAA ACCTACAAGA AGCCGACCGT CTAATGACAG AAATCGCAGA CAAAAGCAGT
GAAATAGCAA GAGCGACTGA GCAGCAAGCG GAAGCGGCGA CCGAAGCCAA CATGAGAATT
AATGCGCTGT CAGGTGCAGC GGATAGCAGC CTTCGTACGG CTGATGAGCT AGCAGCGGCT
AGCCAAGCGT TGCGCAGTAG CTGTTTAGCC ATTATGGAAA TAGCTAATCG ATTTAAACTG
TAA
|
|---|
| Protein sequence | MWLRKFSLIQ RLGIIAALIT LLFVLLTALV LNRHYEALKQ KSYDENQHLV EVVHTLLGSF
AKRDDVDEAT AKQLALEAVK ALRYDGNNYF WIQDETPAMV MHPMKPALDG KDLRTFKDGN
GRAFFLEMAQ KVKAKGAGFV DYVWPLPGEE APTDKISYVK AFKPWGWTVG SGIYLTNLEE
EYAHLRNVIV VFCVVSVVLV ILLIYVIGGS IVKPVQEVSE RMKDISQGEG DLTRSLPETG
QDEVTRLARY FNEYTEKMRQ SLLGIRENIN SLTQQAELVE TSSKNSNARA QTQNENMLQV
AAAMEEMTTQ INEVSNNADS AEKGTSSARS NVQHGASVVD STVQDIRSLT SDIESVSNVV
TELAAQTDSI GAVLDVIRGI AEQTNLLALN AAIEAARAGE QGRGFAVVAD EVRTLASRTG
QSTDEIQAMI EKLQSNAKNA VDAVKVSQAA SSKTVDNAIQ ANQNLQEADR LMTEIADKSS
EIARATEQQA EAATEANMRI NALSGAADSS LRTADELAAA SQALRSSCLA IMEIANRFKL
|
|---|
| |