| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0824 |
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| Symbol | |
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| ID | 4250756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 962790 |
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| End bp | 964454 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117387 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_732961 |
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| Protein GI | 113969168 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00067966 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGAATT TAAGCCTGCG TAATAAATTA CTGCTGTTAT CTTTGTTTCC CCTCATTTTG
ACCCTATTTG TGCTCATGAC CGTCTCCTAC TATGTGGAAC AGGAATCCCT CGCGGAAGAA
GTGGTGACCT TTAGGACTAA GCTGGTGGGC GAACGTAAAC AACAAATTAA AGAAGCTACC
GAAATTGCCG CCGGAATCGT GAAATACCAA CTGTCTCTCA AGGAAAATGG CAATGTAAAT
CAAGCCCTGC GTGATATTCG TTTTGGCAGC GCGGGTTACT TCTTTATGTA TGACTCACAA
GGGAAAAATA TTTTCCACGC TCTGATGCCA AACTTAGAGG GGCAAAACAA AATCGATATG
ACTGACCCCC GTGGCACTAA GATCATTGTC GGTTTGCTGG ATGCGGCAAA ACGGGGAGAC
GGTAACTTTT CCTACTATTA TCAAAAGCCT AATACTAATG AACAAATTGA GAAGATAAGC
TATGTGATGA TGGTTCCTGG CACCGACTGG ATGTTAGGTA CTGGAGCTTA TATCGACGAT
ATCGAAGCGG TTGTCGAGGA TTATCGCCAA ACCGTAACTG AGCAGATGGA CGAAAAATCT
TTCATGATCT TATTGATCGC CCTTGCGCTC ACAGGGATCA CGGCCTTTAT CATCATGATG
GCAGCCCATC GTATGGTCGT ACCGATTAAA CACATGGCGG ATAATCTTAA TGATATTGCC
AAGGGGGAAG GGGACTTAAC CAAACGCTTA AGTGTTAAGG GAGCAGATGA GATTGCCCAA
TTAGGTCAAG CCTTTAACTT GTTCGTCGAT AAGCTGCAAA ACATTATCGG CGATGTAGCG
AATGCGACGG CGAAAGTAAA ATCCGCCGCC AACGCGATTC ACGACCAAAC CAAAGTGATG
TCAAGGCAGC TACTTAGCCA CAACAACGAA ACAGACCAAG TGGTGACGGC CATTACCGAG
ATGTCGTCTA CTGCGAGTGA AGTGGCGCAA AATACCACTC AAGTGGCCGA GGCGACCCAC
GCGGCGACGG GTGATGTAGC CAATGCTCAG CGCTGCGTCG ATGCCTCACT CGAAGAGATT
GCAGGTCTTA TGGCGCAAAT CAATAATGCC GCTGGCAGCA TTAAATCCTT AAGTGAGCAA
TCGCAAAAGA TTAACAGTGT CTTGTCGGTA ATCGGTGGCA TTGCCGAGCA AACCAACCTG
CTGGCCCTCA ACGCGGCGAT TGAAGCAGCC CGCGCCGGTG AACAGGGTCG AGGCTTTGCC
GTGGTGGCCG ATGAAGTGCG TAATCTTGCC AGCCGTACTC AGGCAAGTAC CTTAGAAATC
AACGAAATGC TTTCAGAACT CCACAAGCTG GTGGCCTTAG CGGTAAAAAC CATGGATGAA
AGCCAACAGA GCTGCGTGCG CTCGGTGGAT TCTTCCCGCG CTATTTCGGA AAGCTTAGGC
TCAGTGACAT CGGCGGTGAC TGCGATTAAC GATATGAGTA CCCAAATTGC GACGGCGGCG
ACCGAGCAAA GTTCAGTGAC CGAAGAAATC AACCGTAACG TTTATGCCAT CCAAGAAATC
GTTAACGAGC TGCTGCACTC CAGTGAAGAT GCGGCCAAGG TGAGTCAAAC CGTGTCTCAG
GAAGGGGTTA ACCTGGGTAA ATTGGTGGGA CAGTTTAAGA TTTAA
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| Protein sequence | MSNLSLRNKL LLLSLFPLIL TLFVLMTVSY YVEQESLAEE VVTFRTKLVG ERKQQIKEAT
EIAAGIVKYQ LSLKENGNVN QALRDIRFGS AGYFFMYDSQ GKNIFHALMP NLEGQNKIDM
TDPRGTKIIV GLLDAAKRGD GNFSYYYQKP NTNEQIEKIS YVMMVPGTDW MLGTGAYIDD
IEAVVEDYRQ TVTEQMDEKS FMILLIALAL TGITAFIIMM AAHRMVVPIK HMADNLNDIA
KGEGDLTKRL SVKGADEIAQ LGQAFNLFVD KLQNIIGDVA NATAKVKSAA NAIHDQTKVM
SRQLLSHNNE TDQVVTAITE MSSTASEVAQ NTTQVAEATH AATGDVANAQ RCVDASLEEI
AGLMAQINNA AGSIKSLSEQ SQKINSVLSV IGGIAEQTNL LALNAAIEAA RAGEQGRGFA
VVADEVRNLA SRTQASTLEI NEMLSELHKL VALAVKTMDE SQQSCVRSVD SSRAISESLG
SVTSAVTAIN DMSTQIATAA TEQSSVTEEI NRNVYAIQEI VNELLHSSED AAKVSQTVSQ
EGVNLGKLVG QFKI
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