More than 300 homologs were found in PanDaTox collection
for query gene PputW619_2757 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  93.01 
 
 
544 aa  984    Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  92.83 
 
 
544 aa  979    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  68.76 
 
 
543 aa  671    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  67.9 
 
 
543 aa  720    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  93.38 
 
 
544 aa  966    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  72.98 
 
 
569 aa  777    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  100 
 
 
544 aa  1089    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  66.73 
 
 
544 aa  652    Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  40.91 
 
 
545 aa  410  1e-113  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  41.21 
 
 
548 aa  389  1e-106  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  40.04 
 
 
556 aa  372  1e-101  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  38.94 
 
 
549 aa  367  1e-100  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  38.26 
 
 
540 aa  367  1e-100  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  37.23 
 
 
664 aa  356  5e-97  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.26 
 
 
546 aa  327  5e-88  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  37.02 
 
 
564 aa  320  3e-86  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  34.87 
 
 
549 aa  320  3e-86  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
548 aa  318  1e-85  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  34.94 
 
 
549 aa  318  2e-85  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  36.75 
 
 
546 aa  317  3e-85  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  36.01 
 
 
554 aa  315  9.999999999999999e-85  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
548 aa  311  1e-83  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  33.94 
 
 
544 aa  309  6.999999999999999e-83  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  35.16 
 
 
585 aa  309  6.999999999999999e-83  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  33.15 
 
 
540 aa  308  1.0000000000000001e-82  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  31.07 
 
 
566 aa  306  6e-82  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  30.8 
 
 
566 aa  304  2.0000000000000002e-81  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  32.75 
 
 
570 aa  303  7.000000000000001e-81  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  34.31 
 
 
548 aa  300  5e-80  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
587 aa  298  2e-79  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  35.5 
 
 
554 aa  296  9e-79  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  35.7 
 
 
554 aa  295  2e-78  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  35.7 
 
 
554 aa  293  4e-78  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  34.31 
 
 
554 aa  290  4e-77  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
554 aa  290  4e-77  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  36.21 
 
 
555 aa  288  2e-76  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  34.31 
 
 
554 aa  286  5e-76  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  37.63 
 
 
554 aa  286  8e-76  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  34.55 
 
 
569 aa  286  1.0000000000000001e-75  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
545 aa  285  1.0000000000000001e-75  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
NC_011891  A2cp1_3858  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.5 
 
 
526 aa  285  2.0000000000000002e-75  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  33.63 
 
 
554 aa  285  2.0000000000000002e-75  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
554 aa  285  2.0000000000000002e-75  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  33.87 
 
 
554 aa  285  2.0000000000000002e-75  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1845  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
545 aa  285  2.0000000000000002e-75  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
554 aa  283  4.0000000000000003e-75  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.92 
 
 
554 aa  283  5.000000000000001e-75  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.06 
 
 
584 aa  282  1e-74  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  33.86 
 
 
554 aa  281  2e-74  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0672  methyl-accepting chemotaxis sensory transducer  34.71 
 
 
568 aa  281  3e-74  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3775  methyl-accepting chemotaxis sensory transducer  36.68 
 
 
526 aa  280  4e-74  Anaeromyxobacter sp. K  Bacteria  normal  0.268134  n/a   
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  34.5 
 
 
554 aa  280  7e-74  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  40.12 
 
 
559 aa  279  8e-74  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.95 
 
 
566 aa  279  8e-74  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  35.06 
 
 
568 aa  276  7e-73  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  35.06 
 
 
554 aa  276  8e-73  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  35.26 
 
 
554 aa  275  2.0000000000000002e-72  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
545 aa  274  2.0000000000000002e-72  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  35.15 
 
 
554 aa  274  2.0000000000000002e-72  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  33.53 
 
 
584 aa  274  2.0000000000000002e-72  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  37.19 
 
 
560 aa  274  3e-72  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.54 
 
 
533 aa  273  5.000000000000001e-72  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
554 aa  273  5.000000000000001e-72  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.26 
 
 
554 aa  273  8.000000000000001e-72  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  34.2 
 
 
533 aa  272  1e-71  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
533 aa  272  1e-71  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
554 aa  272  1e-71  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.76 
 
 
533 aa  271  2e-71  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  33.15 
 
 
538 aa  271  2e-71  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_2412  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
545 aa  271  2e-71  Shewanella sediminis HAW-EB3  Bacteria  normal  0.516535  hitchhiker  0.00000653474 
 
 
-
 
NC_007760  Adeh_3718  methyl-accepting chemotaxis sensory transducer  35.52 
 
 
526 aa  271  2.9999999999999997e-71  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.734846  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  32.05 
 
 
585 aa  269  7e-71  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  31.53 
 
 
553 aa  266  8.999999999999999e-70  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
563 aa  265  1e-69  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.33 
 
 
545 aa  265  2e-69  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
545 aa  265  2e-69  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  32.91 
 
 
519 aa  265  2e-69  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  35.52 
 
 
558 aa  263  4e-69  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
545 aa  263  4.999999999999999e-69  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
545 aa  263  4.999999999999999e-69  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  34.04 
 
 
563 aa  263  6e-69  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  34.07 
 
 
536 aa  263  6e-69  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  31.5 
 
 
564 aa  262  1e-68  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  30.7 
 
 
545 aa  262  1e-68  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_6950  putative methyl-accepting chemotaxis receptor/sensory transducer  31.59 
 
 
661 aa  262  1e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  33.89 
 
 
541 aa  261  2e-68  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
545 aa  261  2e-68  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  37.89 
 
 
561 aa  260  4e-68  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  41.87 
 
 
712 aa  260  4e-68  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009784  VIBHAR_05646  histidine kinase  32.37 
 
 
482 aa  260  5.0000000000000005e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  38.04 
 
 
561 aa  260  5.0000000000000005e-68  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  37.74 
 
 
713 aa  259  7e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  33.08 
 
 
678 aa  259  7e-68  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_008576  Mmc1_2492  methyl-accepting chemotaxis sensory transducer  31.09 
 
 
787 aa  259  8e-68  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000288595  normal  0.31948 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  41.48 
 
 
712 aa  257  3e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  37.27 
 
 
560 aa  257  3e-67  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
558 aa  257  4e-67  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  31.53 
 
 
553 aa  256  6e-67  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  34.2 
 
 
533 aa  255  1.0000000000000001e-66  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_011662  Tmz1t_1371  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.78 
 
 
544 aa  255  2.0000000000000002e-66  Thauera sp. MZ1T  Bacteria  normal  0.116754  n/a   
 
 
-
 
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