| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4941 |
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| Symbol | |
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| ID | 6412632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5321317 |
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| End bp | 5323008 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714823 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001993905 |
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| Protein GI | 192293300 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.396774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCTC GACTGCACTT GACGATCGGC CGACGCATCT ACTTGCTGAT CGGCCTCGGT
TTTATCGGCC TTATCGGCCT TACATTGCTG GATTCGCGCG AACTGGCGAC CGGCCTGCAG
CAGCAAAAGC AGATCGAACT CAAACATCTC GCCGAACTGG CGATCAGCTT CGTCAAGGAC
GAATACGACG CCGCGCAGCG CGGCGAGATC AGCACTGACG AGGCGCAGAA GCGCGCCGAG
GCGCGGATCG CCAAACTGCG CTACGGCGGC AACGAGTACT TCTTCATCAC CGACATGCAG
AGCAAAATGC TGATGCATCC GATCGCCAAG CAGTTGGTCG GACAGGATCA GTCGGGCGCC
AAGGACCCGA ACGGCAAGAT GCTGTTCGTC GAGATGGTCA ACACGGTTCG CCGCAGCGGC
AGCGGCTTCG TCGACTACGT CTGGCCGAAG CCCGGCTCCG ATAAGCCGCA GCCCAAATTG
ACCTTTGTGA CCGGGTTCGA GCCGTGGGGC TGGTTGATCG GCACCGGCGT CTATATCGAC
GACCTCGACG CCCAGACCTG GAGCGCGATG CAGCACTCGC TGATCGCAGC GGCGCTGGTG
TTGCTGATCA CCATCGCGGT GTCGGTGTTC ATCGCGCGGC GGATCACTAG GCCAATCCTG
GCGATGACCG GCGCGATGAA GGATCTGGCT GGCGGCCGCA TCGACATCGA AGTGCCGGGC
ATCGGACGCC ACGACGAAAT CGGCGAGATG GCGGAAGCCG TCGAGGTGTT CAAAGTCAAC
GCGCAGGAAC GCCGGCGGCT CGAAGGCGAG CGGCAGGAGA TGGAAGCGCG CGCCGAGGCC
GAACGCCGGG CGCACGCCAA TCAAGTCGCC GAAGCGTTCG AGCGCGCCAT CGGCGAGATC
GTCGAGACGG TGTCGGCGGC CTCGGACGAA CTGGAGGCTT CGGCCACCAC GCTGACCCGC
ACCGCCGAAC AATCGCAGGA GCTGGCGACC GCCGTGGCCG CCGCCTCCGA GGAAGCCTCG
ACCAATGTGC AGTCGGTGGC GTCGGCGACC GAGGAAATGT CGTCGTCGGT CAACGAGATC
AGCCGCCAGG TGCAGGAATC CGCCCGGATC GCCCACGAGG CGGTCGACCA GGCGCGGCAG
ACCAACGGCC GGGTCGAAGA ACTCGCCAAG GCGGCCTCGC GGATCGGCGA CGTCGTCGAA
CTGATCAGCA ACATCGCCGG CCAGACCAAC CTGCTGGCGC TCAACGCCAC CATCGAGGCG
GCCCGTGCGG GTGAAGCCGG CCGCGGCTTC GCGGTGGTTG CCAGCGAGGT CAAGGCGCTG
GCCGAGCAGA CCGCCAAGGC CACCGGCGAG ATCACACTGC AGATCAACGG CATCCAGGCA
GCGACCGACC AGTCGGTGGC GGCCATCAAG GAGATCGGCG AGACCATCGC CAAGATGTCG
GAAATCTCCT CGACGATCGC CTCGGCGGTC GAAGAACAGG GCGCAGCGAC GCAGGAGATC
TCCCGCAACG TCCAGCAGGC CTCGCTCGGC ACCCAGCAGG TGTCGTCCAA CATCACCGAC
GTGCAGCGCG GCGCCACCGA GACCGGCGCG GCTTCGGCCC AGGTGCTGGC GGCGGCGAAG
TCGCTGTCCG GCGACTCAAA CCGGCTCAAG GTCGAAGTCT CGAACTTCCT GGATTCGGTC
CGCGCGGCCT AA
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| Protein sequence | MLSRLHLTIG RRIYLLIGLG FIGLIGLTLL DSRELATGLQ QQKQIELKHL AELAISFVKD
EYDAAQRGEI STDEAQKRAE ARIAKLRYGG NEYFFITDMQ SKMLMHPIAK QLVGQDQSGA
KDPNGKMLFV EMVNTVRRSG SGFVDYVWPK PGSDKPQPKL TFVTGFEPWG WLIGTGVYID
DLDAQTWSAM QHSLIAAALV LLITIAVSVF IARRITRPIL AMTGAMKDLA GGRIDIEVPG
IGRHDEIGEM AEAVEVFKVN AQERRRLEGE RQEMEARAEA ERRAHANQVA EAFERAIGEI
VETVSAASDE LEASATTLTR TAEQSQELAT AVAAASEEAS TNVQSVASAT EEMSSSVNEI
SRQVQESARI AHEAVDQARQ TNGRVEELAK AASRIGDVVE LISNIAGQTN LLALNATIEA
ARAGEAGRGF AVVASEVKAL AEQTAKATGE ITLQINGIQA ATDQSVAAIK EIGETIAKMS
EISSTIASAV EEQGAATQEI SRNVQQASLG TQQVSSNITD VQRGATETGA ASAQVLAAAK
SLSGDSNRLK VEVSNFLDSV RAA
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