More than 300 homologs were found in PanDaTox collection
for query gene VC0395_A2659 on replicon NC_009457
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  100 
 
 
556 aa  1126    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  40.85 
 
 
545 aa  423  1e-117  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  43.3 
 
 
569 aa  410  1e-113  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  41.25 
 
 
543 aa  404  1e-111  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
544 aa  402  9.999999999999999e-111  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  40.04 
 
 
544 aa  393  1e-108  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
544 aa  386  1e-106  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  40.44 
 
 
544 aa  387  1e-106  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  41.03 
 
 
544 aa  382  1e-105  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  41.14 
 
 
540 aa  377  1e-103  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  41.44 
 
 
543 aa  374  1e-102  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  39.88 
 
 
548 aa  373  1e-102  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
548 aa  352  1e-95  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  35.71 
 
 
549 aa  348  1e-94  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  38 
 
 
549 aa  340  5.9999999999999996e-92  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  36.26 
 
 
548 aa  337  5e-91  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  35.25 
 
 
566 aa  336  7e-91  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  35.82 
 
 
566 aa  335  1e-90  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  35.8 
 
 
554 aa  331  2e-89  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  35.62 
 
 
549 aa  322  9.000000000000001e-87  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  33.94 
 
 
585 aa  321  1.9999999999999998e-86  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
548 aa  321  3e-86  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_008322  Shewmr7_1845  methyl-accepting chemotaxis sensory transducer  35.95 
 
 
545 aa  317  3e-85  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  35.3 
 
 
569 aa  317  4e-85  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  35.95 
 
 
545 aa  316  6e-85  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.83 
 
 
546 aa  315  9.999999999999999e-85  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  34.91 
 
 
587 aa  314  1.9999999999999998e-84  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  33.95 
 
 
664 aa  313  6.999999999999999e-84  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  35.27 
 
 
546 aa  311  2e-83  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2412  methyl-accepting chemotaxis sensory transducer  34.5 
 
 
545 aa  311  2e-83  Shewanella sediminis HAW-EB3  Bacteria  normal  0.516535  hitchhiker  0.00000653474 
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  34.69 
 
 
545 aa  308  1.0000000000000001e-82  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  33.27 
 
 
544 aa  307  3e-82  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
545 aa  305  1.0000000000000001e-81  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
545 aa  305  1.0000000000000001e-81  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.51 
 
 
545 aa  305  1.0000000000000001e-81  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  34.88 
 
 
584 aa  304  3.0000000000000004e-81  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
545 aa  304  3.0000000000000004e-81  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
545 aa  304  3.0000000000000004e-81  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.3 
 
 
584 aa  303  4.0000000000000003e-81  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  34.98 
 
 
545 aa  300  4e-80  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.06 
 
 
566 aa  298  2e-79  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  32.4 
 
 
570 aa  295  2e-78  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  33.76 
 
 
541 aa  291  2e-77  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  33.57 
 
 
540 aa  291  3e-77  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  29.96 
 
 
554 aa  290  6e-77  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  31.81 
 
 
558 aa  289  7e-77  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  32.39 
 
 
564 aa  290  7e-77  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  32.25 
 
 
554 aa  289  8e-77  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  32.16 
 
 
563 aa  289  9e-77  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  31.31 
 
 
554 aa  286  5.999999999999999e-76  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  31.49 
 
 
554 aa  285  1.0000000000000001e-75  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  33.82 
 
 
538 aa  285  1.0000000000000001e-75  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  34.35 
 
 
559 aa  285  2.0000000000000002e-75  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  32.28 
 
 
564 aa  285  2.0000000000000002e-75  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  31.05 
 
 
555 aa  284  4.0000000000000003e-75  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  30.77 
 
 
554 aa  283  7.000000000000001e-75  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  31.31 
 
 
554 aa  283  8.000000000000001e-75  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  30.76 
 
 
554 aa  282  1e-74  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  31.55 
 
 
554 aa  282  1e-74  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  30.31 
 
 
568 aa  281  2e-74  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.82 
 
 
533 aa  281  3e-74  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
554 aa  280  5e-74  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  30.76 
 
 
554 aa  280  7e-74  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  31.41 
 
 
554 aa  279  8e-74  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.57 
 
 
554 aa  279  9e-74  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
554 aa  279  9e-74  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3858  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.02 
 
 
526 aa  279  1e-73  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2194  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
545 aa  278  2e-73  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00216283 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  29.7 
 
 
554 aa  278  2e-73  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
554 aa  278  3e-73  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  29.88 
 
 
554 aa  276  5e-73  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
554 aa  276  6e-73  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  29.88 
 
 
554 aa  276  9e-73  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05646  histidine kinase  37.95 
 
 
482 aa  275  2.0000000000000002e-72  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  29.86 
 
 
554 aa  275  2.0000000000000002e-72  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  32.92 
 
 
560 aa  274  2.0000000000000002e-72  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  32.27 
 
 
563 aa  273  4.0000000000000004e-72  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.68 
 
 
554 aa  273  7e-72  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  28.62 
 
 
715 aa  273  8.000000000000001e-72  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  34.11 
 
 
517 aa  270  4e-71  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  32.44 
 
 
557 aa  270  4e-71  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  34.11 
 
 
517 aa  270  4e-71  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3775  methyl-accepting chemotaxis sensory transducer  30.91 
 
 
526 aa  268  2e-70  Anaeromyxobacter sp. K  Bacteria  normal  0.268134  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  33.39 
 
 
536 aa  268  2e-70  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
517 aa  268  2e-70  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  33.79 
 
 
517 aa  265  1e-69  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
517 aa  266  1e-69  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  33.22 
 
 
567 aa  265  2e-69  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009901  Spea_1997  methyl-accepting chemotaxis sensory transducer  36.05 
 
 
546 aa  264  3e-69  Shewanella pealeana ATCC 700345  Bacteria  normal  0.179465  n/a   
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
517 aa  264  4e-69  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  33.59 
 
 
517 aa  263  4e-69  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  30.99 
 
 
553 aa  263  4.999999999999999e-69  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_3718  methyl-accepting chemotaxis sensory transducer  30.14 
 
 
526 aa  263  4.999999999999999e-69  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.734846  n/a   
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
563 aa  263  4.999999999999999e-69  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  30.45 
 
 
553 aa  263  6e-69  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  32.79 
 
 
533 aa  262  1e-68  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_009485  BBta_6950  putative methyl-accepting chemotaxis receptor/sensory transducer  32.86 
 
 
661 aa  262  1e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.79 
 
 
533 aa  262  1e-68  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
541 aa  261  2e-68  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
541 aa  261  2e-68  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
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