| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2492 |
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| Symbol | |
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| ID | 4484162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3177185 |
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| End bp | 3179548 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639723240 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_866398 |
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| Protein GI | 117925781 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000288595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.31948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTC TGTTTTTAAA GCTCAATATA CGCACACGCA TCTGGTTATT GATCGTGTTG
GCGGTGGTTA TCTTTTGGCT GAGTGGTCTA ACCTTTTTGT TGGATCAAGA CAAAGCCTTA
ATGCACTCCA GACAGCAGAA AACGCAGCAG TTGGTCGAAA CCGCCCATAG TGTGTTGGTG
GATTTTTACC AAAAGGTGCA GGATGGCAAA ATAACCGAAG AGGCCGCTAA AAAACACGCT
ATAGAAGTGT TAAAAGGTTT GCGTTATAAC AAAAACGACT ATTTCTGGGT TAACGATTAT
CACGCCGTGA TGGTGATGCA CCCCATCAAA CCCGCCTTGG ATGGAAAGGA TCTTGCCAAT
TTTGAAGATA AGGGGGGCAA GAAAATCTTC ACCGAATTTG CCAAGGTCGC CAAAGAGCAG
GGTGAAGGTT TTGTGGAGTA TCTATGGCCA AAGCCAAACT TTGAAGCACC GGTGGAGAAG
CTCTCTTTTG TTAAAGGGTT TAAACCTTGG GGCTGGGTGG TTGGCTCGGG CATCTATATT
GATGATGTGC GGGCGGCCTT TTGGCGTAAT GCCTGGGCAT TGACCCTGCG TTTTCTGTTT
GTGACGGTGA TTTTGGTGGG GTTGGCGTCG CTGGTGGCGC GCAGCATTAC CAAACCCTTG
GGGCTGCTGT TTGAGGGGAT TCAGCACGCC GTCTCGGGTA AGTTACTCCA GCGTATTCCC
ATCCCCTTTG TCAAAGATGA TGTGCTGGAG TTGGGTGAAA AAATCAACTC TATGACCGAT
GGATTGGCGC AAAACGTCTG GAGCAGCACC CTGCACTCCG AGAGTATTCG CTCCTGCGTG
ACCGAGTTTG GTGAGGTGTT GGAGAGTTTA ACCAAAGATA CCAGCGATGC CAAACATATC
GGCTCTAACG TCAAACGCGA GCAAGAAAAC CTTAACCAAG AGATGACAGC GATTCACCAT
GCGGTGACCC TAGCAACGGA TAACTTGGAT CGCATAGGCC AGTCGTCAGA AAATCTTTCC
AGCATGATTC AGGGTATGGC GGATGCCTCC ATGGAGACCT CCGCCGCCGT TAACACCGTG
GCTTCTGCGG CCGAGGAGAT GACCGCCAAC GTCACTCAAG TCAACGGTAA CTTGGCGCAG
GTGAGCCATG AGGTCGGTTC GGTTTCGGGC TCCATTGCGG ATATGGCCGA GGCGTTGGAT
GAGATCTATC GGCGCTGCTA TCGTGCCAAC CAGCGCTCGG AGCAGGCTAC AGAGCAGGCC
AATAACACCC TAAAGGTGAC CGAGCAGCTC TCCCATTCGG CGGTGGAGAT TGGACGCGCC
ATTGAGGTGA TTAATAATAT TGCCGAACAA ACCAATATGT TGGCCCTTAA TGCCTCCATT
GAGGCCGCTG GGGCAGGCGA GGCGGGTAAG GGCTTTGCGG TGGTGGCCAA CGAGGTTAAA
GAGTTGGCCA GTCAAACCGC CGAAGCCACC CAGATGATCG CCAACCAGGT GCAGGAGATC
CAGGATCATA CCCGCCAAGC TACGCGAGCT GTGGATGGTA TTACGGAGAT GATTAAGGAT
CTCAACAACT CCAACAGTGA GATCAGTGAT CTGGTGGAGG AGCGTAAACT GTCGGTGCAG
GAGATCAATC TCTCCATCCG ACATGTTTCC GAGGCAGCCC AGGCGGTTAC GTTAAATGCC
CAGGAGTTGG GGCAGGCCAT TAGTGAAATT GCGCAAGCCG CCGCCGCCGC CGCTTCGCAG
ACCGATAGCA TGGTTGATGC CACCAACCGT AGCATGGAGG CCGCGACAGC GACGGTGCAG
CAAGGCCACG ATGCCCGTGG GGCCATGGAG AAGATTCAGC TCTCCACCGA TCAAGCAGAA
ACCTATTCCA GCCGGGTGGA TGATGAAGCC AAGGCGCTGT TTCAATTGGT CTCTTATCTG
GAAGGCTCGA CCAACTATTT CCACAGTCTG CTCCAGGTGA TCCAGAGTAC CGCCAAGGAT
ATGGGCAAAC GGGAAGCGAT GCAGGCTGGG GAACCCCCGT TTGATATCTT TATGATTAAA
TCGGCCCATT TGGCGTGGCT TAACCGGTTG GAAAAAATGA TGCGGGGCCG GGTGCAGCTA
AAGCCCGAAG AGGTCGCCAG CGAGCGTCAG TGTGCGTTTG GTAAATGGTA CTACAGTGAG
GGCACGGCCA AATTTGGCGA GAACCCCATT TTTCAATCCA TTGAGCCAGA GCATATGAAA
GTCCACCAAA TGGCCCGCGA GGTGGCCGAG ATGGTGGCGC GGGGCGAGGT GGAGAATGTG
CGGGCATTGA TCGAAAAGTT TGATGTGACC AAGGATATTC TGTTTGAACG GCTGGATGCG
CTCTACTTGA GCCAATGGAA ATAG
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| Protein sequence | MSALFLKLNI RTRIWLLIVL AVVIFWLSGL TFLLDQDKAL MHSRQQKTQQ LVETAHSVLV
DFYQKVQDGK ITEEAAKKHA IEVLKGLRYN KNDYFWVNDY HAVMVMHPIK PALDGKDLAN
FEDKGGKKIF TEFAKVAKEQ GEGFVEYLWP KPNFEAPVEK LSFVKGFKPW GWVVGSGIYI
DDVRAAFWRN AWALTLRFLF VTVILVGLAS LVARSITKPL GLLFEGIQHA VSGKLLQRIP
IPFVKDDVLE LGEKINSMTD GLAQNVWSST LHSESIRSCV TEFGEVLESL TKDTSDAKHI
GSNVKREQEN LNQEMTAIHH AVTLATDNLD RIGQSSENLS SMIQGMADAS METSAAVNTV
ASAAEEMTAN VTQVNGNLAQ VSHEVGSVSG SIADMAEALD EIYRRCYRAN QRSEQATEQA
NNTLKVTEQL SHSAVEIGRA IEVINNIAEQ TNMLALNASI EAAGAGEAGK GFAVVANEVK
ELASQTAEAT QMIANQVQEI QDHTRQATRA VDGITEMIKD LNNSNSEISD LVEERKLSVQ
EINLSIRHVS EAAQAVTLNA QELGQAISEI AQAAAAAASQ TDSMVDATNR SMEAATATVQ
QGHDARGAME KIQLSTDQAE TYSSRVDDEA KALFQLVSYL EGSTNYFHSL LQVIQSTAKD
MGKREAMQAG EPPFDIFMIK SAHLAWLNRL EKMMRGRVQL KPEEVASERQ CAFGKWYYSE
GTAKFGENPI FQSIEPEHMK VHQMAREVAE MVARGEVENV RALIEKFDVT KDILFERLDA
LYLSQWK
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