| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0962 |
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| Symbol | |
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| ID | 5134514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 939140 |
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| End bp | 941071 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531284 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001215798 |
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| Protein GI | 147671668 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000917898 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGG CAGGGGGAGT CATGACTCTA GGATTCAAAG GAAGAATATA CGCCAGTGTG
GTCATTTTAG TGACCATATC GCTGATGGTG TTAGGTACGA TTAATATGCT CTCTCTCAAA
CGAGAGATGA TTGATTCATT AACGACCGAA ACGCAAAACA AGCTCAATTA CCATGTGTCA
GAACTCGAGT TTTGGGTGAA AAGTCGTTAC GAGGCCGTAT CTCGTGGTGC GAACTTGTTT
ACTCCAGAGT TATCGGATAC CGATAACCTC AATAAAGTAC GACTTTTGGC GGAAGCGGCG
CAGATCACCA ATGTGATTGC GGCCTACGAA GATGGTCGCT CTTATATGTC GATGGACAAA
GAGGGGGGAG TGACGACAAA TCGGTTTAAA TTTACTGACC GTGACTGGTA TCAACAGGCC
AAAAGTCGTC GTAGCCCATT TTTGACTGAG ATTTATCAAG ATCAAGTCAC TGGCAAAAAA
GTGATCAGTG CGGTTAGCCC GATTCTTCAT CAAGGCCAAT TTGTGGGGGC TTTGCTGGGT
GACTTCCAGC TTGATGACAT CATCACTCAA GTGAGTAACA TGCGTTTTGC CGGAGGCGCA
GCGACACTGA CCGATAAAAA TGCGGTGTTT TTTGCCAGTG ATGATCCCAA CGATATTGGC
CGCACCCCTT CCCAAGTCAG CCCATCGTTT CGCGAAATGG AAGCTGGGTT TCACCGTCAA
GAGAGTGGAC ATCTTTCGTT CCCGTACCTA GGGATTGAAT TTGATGGTTA CTACAAACGT
GTCAATCTAA CCGATGATAT GTACTGGACC TTGATGGTGT TTGTTGATAA AGCCACCGCA
TTAGCGGATG TCGATGTCGC CGTAGCGAAT GCGATCACAA CTGGGATAGT ACTTATCGGG
ATCAGTGTTG GGGTGATTAT CTTCATTATC AATCAAATCT ATAAACCTTT GCTGCGTTTG
AAAGTCGCGG TTTTGGATTT GGCTCAAGGC AGCGGGGATT TAACTCGTCG CTTAGAAGTG
AATGGTAATG ATGACTTGGC GCAGATCAGT GAAGGCTTCA ACCGTTTTTC AGGTAATTTA
CAAAACATGA TGCTGCAGAT TTCCGATGCA ACACAGATCA TATCAAGCAG CATTGAGCAG
TTAAGCCAGA CGGCGAAAGA GAACGAACAG ATGTTGATTT CTCACTCTTC CGAAACCGAT
CAGGTGGTTA CTGCGATCAC GCAAATGAGT GAGAGTGCGC GCACGGTTGC GGAAAGCGTC
ACGCAATCAA ATCAGATCAC AGAAGCCGCG AGCAAAGAAG CGCAGCAATC TTTGGTGATT
GTGAATAATG CCGTATCTAC GGTGACTTCT TTGGTCAACG ATGTGGAAAA TATGTCCGAA
AGCATCTCTA ACATGAATCG TGATGCAAAC AAAATCAGCG AAGTGTTGAG TGTGATTGGC
GCAATCTCAG AACAAACGAA CCTGCTGGCT TTAAACGCTG CCATTGAAGC GGCGCGAGCG
GGTGAACAAG GTCGCGGTTT TGCGGTGGTG GCCGATGAAG TGCGTGCCTT AGCGGCAAGA
ACGCAAAATA GCACCACGGA AATCTCCGAT ATGTTGACGA AATTGCTGGA AGGTACCGAC
AGCGTCGTGG GTGCAATGGA GCGTACTAAG CAGCAGTGTC AAACGACGGC GGATAAAACC
TCTGAAGTGT CAGGCAGCCT GAATATGATG AGTGCATCGG TGAGCGACAT TGATGATCTC
AGCACACAAA TTGCGGCGGC GACAGAGCAG CAAAGTACGG TGGCCGCAGA GCTTAGCCGT
AACATGCTCT CAATCCGTGA GATAGTCGAG TCTCTTGTGG TCAGCGGAAG ACAGACCGTA
GGCGCGACAG AATCGCTTTC TCACTCGAAT CATGAATTAG AACAGCTAGT AGGCAAATTT
AAACTGCGTT AA
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| Protein sequence | MKTAGGVMTL GFKGRIYASV VILVTISLMV LGTINMLSLK REMIDSLTTE TQNKLNYHVS
ELEFWVKSRY EAVSRGANLF TPELSDTDNL NKVRLLAEAA QITNVIAAYE DGRSYMSMDK
EGGVTTNRFK FTDRDWYQQA KSRRSPFLTE IYQDQVTGKK VISAVSPILH QGQFVGALLG
DFQLDDIITQ VSNMRFAGGA ATLTDKNAVF FASDDPNDIG RTPSQVSPSF REMEAGFHRQ
ESGHLSFPYL GIEFDGYYKR VNLTDDMYWT LMVFVDKATA LADVDVAVAN AITTGIVLIG
ISVGVIIFII NQIYKPLLRL KVAVLDLAQG SGDLTRRLEV NGNDDLAQIS EGFNRFSGNL
QNMMLQISDA TQIISSSIEQ LSQTAKENEQ MLISHSSETD QVVTAITQMS ESARTVAESV
TQSNQITEAA SKEAQQSLVI VNNAVSTVTS LVNDVENMSE SISNMNRDAN KISEVLSVIG
AISEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRALAAR TQNSTTEISD MLTKLLEGTD
SVVGAMERTK QQCQTTADKT SEVSGSLNMM SASVSDIDDL STQIAAATEQ QSTVAAELSR
NMLSIREIVE SLVVSGRQTV GATESLSHSN HELEQLVGKF KLR
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