More than 300 homologs were found in PanDaTox collection
for query gene VC0395_A1023 on replicon NC_009457
Organism: Vibrio cholerae O395



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  100 
 
 
578 aa  1176    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02418  hypothetical protein  68.34 
 
 
578 aa  798    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_4711  methyl-accepting chemotaxis protein  47.52 
 
 
633 aa  288  1e-76  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  42.44 
 
 
643 aa  285  2.0000000000000002e-75  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
632 aa  280  5e-74  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_009831  Ssed_4216  methyl-accepting chemotaxis sensory transducer  41.84 
 
 
647 aa  280  5e-74  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3839  methyl-accepting chemotaxis protein  42.86 
 
 
636 aa  279  1e-73  Colwellia psychrerythraea 34H  Bacteria  normal  0.406017  n/a   
 
 
-
 
NC_009831  Ssed_1498  methyl-accepting chemotaxis sensory transducer  46.31 
 
 
687 aa  279  1e-73  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000111484  normal 
 
 
-
 
NC_009665  Shew185_2544  methyl-accepting chemotaxis sensory transducer  42.63 
 
 
633 aa  276  7e-73  Shewanella baltica OS185  Bacteria  hitchhiker  0.00517521  n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  33.84 
 
 
558 aa  273  7e-72  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2783  methyl-accepting chemotaxisprotein  40.94 
 
 
690 aa  266  8e-70  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.468562 
 
 
-
 
NC_004578  PSPTO_3237  methyl-accepting chemotaxis protein  43.41 
 
 
771 aa  266  8.999999999999999e-70  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  40.05 
 
 
554 aa  257  4e-67  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  43.9 
 
 
554 aa  257  5e-67  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  32.26 
 
 
554 aa  255  1.0000000000000001e-66  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  36.03 
 
 
554 aa  254  3e-66  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  39.8 
 
 
554 aa  254  3e-66  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3044  methyl-accepting chemotaxis sensory transducer  44.12 
 
 
688 aa  254  3e-66  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  39.95 
 
 
554 aa  254  4.0000000000000004e-66  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  39.85 
 
 
554 aa  253  7e-66  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  39.8 
 
 
554 aa  253  8.000000000000001e-66  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  36.08 
 
 
554 aa  251  2e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2554  chemotaxis sensory transducer  43.5 
 
 
663 aa  248  3e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.486048 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  39.74 
 
 
555 aa  248  3e-64  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3924  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
527 aa  247  4e-64  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
554 aa  246  9.999999999999999e-64  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3728  methyl-accepting chemotaxis sensory transducer  44.09 
 
 
527 aa  246  9.999999999999999e-64  Shewanella sp. MR-4  Bacteria  normal  normal  0.436185 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
554 aa  246  9.999999999999999e-64  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3799  methyl-accepting chemotaxis sensory transducer  44.09 
 
 
527 aa  246  9.999999999999999e-64  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
554 aa  245  1.9999999999999999e-63  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.4 
 
 
554 aa  245  1.9999999999999999e-63  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
554 aa  245  1.9999999999999999e-63  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  41.81 
 
 
554 aa  244  1.9999999999999999e-63  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  41.81 
 
 
554 aa  244  1.9999999999999999e-63  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  38.69 
 
 
554 aa  244  3e-63  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  40.82 
 
 
568 aa  241  2e-62  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.94 
 
 
554 aa  241  2.9999999999999997e-62  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  40.82 
 
 
554 aa  241  2.9999999999999997e-62  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  41.9 
 
 
554 aa  241  2.9999999999999997e-62  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0226  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
527 aa  233  8.000000000000001e-60  Shewanella baltica OS223  Bacteria  normal  normal  0.16836 
 
 
-
 
NC_009997  Sbal195_4233  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
525 aa  233  9e-60  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000524679 
 
 
-
 
NC_009665  Shew185_4113  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
527 aa  232  1e-59  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.3 
 
 
626 aa  227  4e-58  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.21 
 
 
626 aa  224  4e-57  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  38.23 
 
 
553 aa  222  1.9999999999999999e-56  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  36.31 
 
 
564 aa  221  3e-56  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  37.11 
 
 
553 aa  221  3e-56  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  37.78 
 
 
568 aa  221  3.9999999999999997e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  36.44 
 
 
557 aa  220  6e-56  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
773 aa  218  2.9999999999999998e-55  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  37.85 
 
 
548 aa  217  4e-55  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  39.02 
 
 
636 aa  216  7e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  34.96 
 
 
559 aa  216  9.999999999999999e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  40.24 
 
 
637 aa  216  9.999999999999999e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  32.32 
 
 
627 aa  216  9.999999999999999e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  38.11 
 
 
545 aa  216  9.999999999999999e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.66 
 
 
627 aa  213  5.999999999999999e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  33.92 
 
 
712 aa  213  9e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  34.22 
 
 
713 aa  213  9e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  34.01 
 
 
712 aa  213  9e-54  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  33.83 
 
 
639 aa  213  1e-53  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  34.67 
 
 
636 aa  213  1e-53  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  29.7 
 
 
638 aa  212  2e-53  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  36.28 
 
 
716 aa  211  3e-53  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  38.91 
 
 
561 aa  210  6e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  34.31 
 
 
638 aa  209  8e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  38.91 
 
 
561 aa  209  9e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  33 
 
 
640 aa  209  1e-52  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  34.67 
 
 
636 aa  209  1e-52  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  36.24 
 
 
560 aa  208  2e-52  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
541 aa  205  2e-51  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  34.65 
 
 
499 aa  204  3e-51  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  36.09 
 
 
558 aa  204  3e-51  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  35 
 
 
641 aa  204  5e-51  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  35 
 
 
638 aa  204  5e-51  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  35 
 
 
638 aa  204  5e-51  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
637 aa  204  5e-51  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  35 
 
 
638 aa  204  5e-51  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  34.3 
 
 
630 aa  203  6e-51  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  34.3 
 
 
630 aa  203  6e-51  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  36.78 
 
 
560 aa  203  8e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1310  methyl-accepting chemotaxis sensory transducer  35.07 
 
 
497 aa  202  9.999999999999999e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  0.615607  normal 
 
 
-
 
NC_009831  Ssed_3256  methyl-accepting chemotaxis protein  35.73 
 
 
558 aa  202  9.999999999999999e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  37.92 
 
 
697 aa  202  9.999999999999999e-51  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  33.69 
 
 
640 aa  202  9.999999999999999e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  32.89 
 
 
641 aa  201  1.9999999999999998e-50  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  34.91 
 
 
543 aa  201  1.9999999999999998e-50  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  32.06 
 
 
640 aa  202  1.9999999999999998e-50  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  34.91 
 
 
543 aa  201  1.9999999999999998e-50  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  34.19 
 
 
628 aa  202  1.9999999999999998e-50  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  33.77 
 
 
638 aa  201  3e-50  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_009997  Sbal195_3579  methyl-accepting chemotaxis sensory transducer  34.91 
 
 
543 aa  201  3e-50  Shewanella baltica OS195  Bacteria  normal  normal  0.0986947 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
638 aa  201  3e-50  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  34.04 
 
 
630 aa  201  3.9999999999999996e-50  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0908  methyl-accepting chemotaxis sensory transducer  34.91 
 
 
543 aa  201  3.9999999999999996e-50  Shewanella baltica OS155  Bacteria  normal  0.073872  n/a   
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
638 aa  201  3.9999999999999996e-50  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
638 aa  201  3.9999999999999996e-50  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  33.77 
 
 
630 aa  200  5e-50  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  39.02 
 
 
544 aa  200  6e-50  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  33.77 
 
 
630 aa  200  6e-50  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>