Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3799 |
Symbol | |
ID | 4255383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4516140 |
End bp | 4517723 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124490 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_739835 |
Protein GI | 114049285 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAACA ATGCAAAAAC CAGCACATTG ACGGCGCTGC CCTCAGTGTT TGCGAGTATT TTATTGATCA TTATCGGCAT TTCCTCCTAT CGGGGCTTTG CCGAACTCAA TGACACCAGC AGCAGACTTG TCAACAATAC CCAGCTCGCA GAGACTTTCA CGAGTGTGCG AGAATCGTTT TTCGAGTTGC GCTTAGCGAC ATTAGTCCAT AACAGCGATG CCATCAGTAC ACAGCAACGC AATGTGCAGC AGCTCATTGA AAAACTCGAA GACTTTAATA CCGATTTTAT GGGGCAAGAT GCCAGAACGA TCCGCACGCT ATTACCGCAA ATTGAGCAAT ATGTGCGTCT ATATCAGCAA GAAATCGCCT ACGCCAAACA AACTGGCACA GAACCAGAAC TTACACGCGA GCGCGGGGCT CTTGGTCCCA AGGTAAGTCA TGAGATTAAT CAATTAGTTA AGTTGATCAC TCAACGCAAC CATGAACTGG GTAAACAGGC AGAAGATAAA GTAAACGCCA CCGAGGCATT GCTCCTTGGC CTAATCCTAA TTGCGATTGT CGCTTCCTTA CTAAGCGCCT TCTTTATGAG CAGACGTTTG GTCAATATTG TTAATCAAAT CAAACGTGTT GTTGAGCGCC TTGCCGATGG CGATCTGACT CAGAAGACTC AAATCAGTGG GCAAAACGAA CTCTGTGCGC TCGGCGCCGA TCTCGACCGA GTGATTGACC ACTTGCGTCA TATGATTTCC GATATTGCCC AGGCCTCTGA CCATATGTCG GATCAAATTG GTCAGTTGAA TGTGCAGTCC AATGCCAATA CCCATGCATT GCAAACCCAC GCGGTAGAAA CCGACCAAGT GGTGACGGCC ATGACCGAAA TGAGTGCAAC TGCCCATAAC GTTGCCGGTG ATGCCGCCTC TGCCGCACGC TTTACCCAAC AGGCAAATGA ACAGGCTGAT AAGTCGAAAA AGGCTGTCGA ACAGGCGGCA AATACTGTCG TCGCCTTAGT TGGTAAGGTC GATACCGCCG CCCACACCAT AGCGGAGATG AATGAAAACA CCCGTCATAT CGCCACCATC TTAGATGTGA TTGGAGATAT CGCCGACCAA ACCAACTTAC TCGCACTTAA CGCCGCCATC GAAGCCGCCC GCGCCGGTGA ACAAGGTCGA GGCTTTGCCG TGGTCGCCGA CGAAGTACGC GCCCTCGCGG CTCGCACCCA AGCGAGCACG GCCGAGATCA ATCAAATGCT AGAACGCCTG CGCACGGGTG CTAACAGCGC CGTTAATGCG ATGGATGAGA CCAAACAGAG TTGCCAAGAT GCAGCGGACA CCACCACGCT GGTGACTGAA AGCCTTGAAA CCTTGACCAC TTATGTATTT GATATTAATG GATTGAGCAA TCAAATCGCC ACCGCCGCCG AAGAACAAAG CGCCGTGAGT GAAGAGATTA ATCGTAACTT GAATACCATT CGCGAAATGG TTGAAGAGTT AAATCAAAGC GGTAAAGCAA CCCTCAATAG CGCGACCTCT TTGGCCGCCA CGAAAGAACA GCTAACAGGC GTAGTCTCGC ATTTTAGACT CTAA
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Protein sequence | MFNNAKTSTL TALPSVFASI LLIIIGISSY RGFAELNDTS SRLVNNTQLA ETFTSVRESF FELRLATLVH NSDAISTQQR NVQQLIEKLE DFNTDFMGQD ARTIRTLLPQ IEQYVRLYQQ EIAYAKQTGT EPELTRERGA LGPKVSHEIN QLVKLITQRN HELGKQAEDK VNATEALLLG LILIAIVASL LSAFFMSRRL VNIVNQIKRV VERLADGDLT QKTQISGQNE LCALGADLDR VIDHLRHMIS DIAQASDHMS DQIGQLNVQS NANTHALQTH AVETDQVVTA MTEMSATAHN VAGDAASAAR FTQQANEQAD KSKKAVEQAA NTVVALVGKV DTAAHTIAEM NENTRHIATI LDVIGDIADQ TNLLALNAAI EAARAGEQGR GFAVVADEVR ALAARTQAST AEINQMLERL RTGANSAVNA MDETKQSCQD AADTTTLVTE SLETLTTYVF DINGLSNQIA TAAEEQSAVS EEINRNLNTI REMVEELNQS GKATLNSATS LAATKEQLTG VVSHFRL
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