| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0081 |
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| Symbol | |
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| ID | 3967320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 102146 |
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| End bp | 103780 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919140 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_525557 |
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| Protein GI | 90019730 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGT TTAACGATCT CTCATTCCGC TGGAAGTTAC GTCTTCCCTT GGCCCTTATT
GGCCTATTAA TGGCTTTTAT AGCCCTTATG GCGATGATGA TTCTTAGTGA AATAAGCCGC
TCTTCAGCGC AGGTAACTGA GAACAATTTA CCAGCTACGG AGTTTCTACT AGAGGCAGAT
CGCGATTTGC ACCAATCGCT TATTGCAGAG CGGACTTTAG TGTTAAGCCC TGCCAATCAA
GTAAACGCCA GTGAATTGCG CAAAACACTG AATGAGAACC TCGACCAAGC TAAAACCCGC
GTAGCCAAGT TCGAAGCATT AATGGACGAC TCGGAAATAA AGAGCTTGGT TGGCGACTTT
AACCGCCGCT TTGATAAACG CAGAGCAACA ACAGAGCGTT TGCTCAGTAG CTTGGATTCA
AATCGCGCAA GCGCCGTGCA AATAAGTATG GGCGAAGCCG CTACCCAATT TGATGAAATG
CGCGATGTGA TTGATACCCT AACCGAGCTT ACCCATCGCA AGTCTGTTGT GTTAAGCGAT
GAAATAGCAG CCAGCGCTGC GGCTGCCCAA ATTAAAATGA TGAGCTTATT AATTGTGGGC
TTAGCACTTT GCCTAGCGCT GGGCATATTG CTGCCACGCT TTGCCGGTGC GCGGTTAAAT
GCGCTACTAG AGCGACTTAA ATCTATAGCC GAAGGCGATG GCGACCTAAC CCAGCGCCTA
GAAACAACAG GTAAAGATGA GTTTGGCCAA ATAGCCCACG AGTTCAATGT GTTTGTGGCT
AACTTACAAG AAAGTATCGC TAATGTAGTG GCGGTATCCA ATCAGCTTGC AGACAAATCT
AACTACATTG ATAAAGAAAG TAACTCCACC AGCCAAACCG CCGATCGCCA GCGCCAAGAA
ACCACCATGG CGGCAACCGC CATTAACGAG ATGAGCGCAA CCGTGTTAGA GGTAGCGCGC
AATACTTCCA GTGCCGCCGA CTCAGCCAAA AGTGCAGATC AATGTGCCGT AGACGGACAA
AAAATTGTGA CCGCCATGGC GCGCGGTGTA GAAGCCTTAG CGGAAGAAAT AGAAACTTCA
TCTAGCGCTA TTAATTTACT TAAGGAAGAT TCGGTAAGTG TTGGGGCCGT ACTGGATGTG
ATTCGCGGCA TAGCCGAACA AACTAATTTA TTGGCATTGA ATGCCGCTAT TGAAGCCGCG
CGCGCGGGCG AGCAAGGCCG CGGCTTTGCA GTGGTAGCCG ATGAAGTACG CACCCTGGCC
CAACGCACGC AAGAGTCTAC CCAAGAGATA CGCGAAGTAA TTGAGCGCCT ACAAGGCGGT
GCAGATACCG CGGTAGAGCG CATGACAGGC AGTAGCCGCA AAGTAGGCGA AAACGTCGAT
GCCGCCAATA ACGCAGGCGC AGCATTAGCC AATATTACCG AGGCGGTAAA ACAAATAGTG
GATTTAAACG TGCAAATTGC CAGCGCTGCA GAAGAACAAA CCACGGTAAC CGAAGAAATT
AACCGAAATA TGGTGAATAT TTCTGAGCAA ACCGAAATAA CCGCAGAAAG TGCACAATCA
CTGGCCACAG CCGCGCAAGA GCTGCGTAAT TTATCGGATA ATTTGCATCA AACCGTTGGT
CGCTTTAAGG TGTAA
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| Protein sequence | MEWFNDLSFR WKLRLPLALI GLLMAFIALM AMMILSEISR SSAQVTENNL PATEFLLEAD
RDLHQSLIAE RTLVLSPANQ VNASELRKTL NENLDQAKTR VAKFEALMDD SEIKSLVGDF
NRRFDKRRAT TERLLSSLDS NRASAVQISM GEAATQFDEM RDVIDTLTEL THRKSVVLSD
EIAASAAAAQ IKMMSLLIVG LALCLALGIL LPRFAGARLN ALLERLKSIA EGDGDLTQRL
ETTGKDEFGQ IAHEFNVFVA NLQESIANVV AVSNQLADKS NYIDKESNST SQTADRQRQE
TTMAATAINE MSATVLEVAR NTSSAADSAK SADQCAVDGQ KIVTAMARGV EALAEEIETS
SSAINLLKED SVSVGAVLDV IRGIAEQTNL LALNAAIEAA RAGEQGRGFA VVADEVRTLA
QRTQESTQEI REVIERLQGG ADTAVERMTG SSRKVGENVD AANNAGAALA NITEAVKQIV
DLNVQIASAA EEQTTVTEEI NRNMVNISEQ TEITAESAQS LATAAQELRN LSDNLHQTVG
RFKV
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