| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1929 |
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| Symbol | |
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| ID | 4921257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2227766 |
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| End bp | 2229754 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163497 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001094054 |
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| Protein GI | 127512857 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.23754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0188929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGC AATGGATCAG TGATCTCAAT ATAAAAAATA AGCTTTTGCT GGTGATAGTG
CCGCCCATTC TGGGGGCAAC TTTCTTCGGT CTGTTCGTGG TCTATGGCCA ATATCAGCTG
CATCAGGGAC TGAGCCAGGT AGAGACGCTT TCCGAGCTGG CTGTGGTGAA CAGTGATTTT
GTGCATGAGC TGCAAAAAGA GCGAGGCATG AGCGCCGGCT TTCTCGGCTC AAAAGGCAAG
AGTTTTGGCG ATAAACTGCC AACGCAACGT CAGTTGAGTG ACGAGCAGCT TAATAACTTC
AAGGCCTTTA CGGCAAGTCA TGAGCTGCCC AAGGCGTTTG CCCAGCAGAT GAGTCAGGTC
AATCAGATGA TTAATCAGCT CGGCGATATC CGCAGCAGGG TCGACAGCTT AAGCATCTCT
GTGCCGGAAG AGGTGGCCTA TTACACCAAG CTTAATGGCC TGCTGCTGGA GATTGTAGAT
CAGACCAGTC AGCAGGGGGC TAGCCGTCAG ATCGCGGTGG AGTCGGCCAG TTTTGCCGCC
TATCTGCAGA TGAAGGAGCG CGCCGGTATC GAGCGCGCCG TGCTGAGCTC CACCTTTGGT
AACAGCGCCT TTAAACCCGG CATGTTCCTC AAGTTTGTCA ATTTGGTCTC AGAGCAGAAC
ACCTATCAGG AGCGCTTCTT AGCCTTGGCG ACCGATAAGG TAAACGCCGA TTATCAGCAG
GTCGTATCAT CGCCCACCTT TATGGCGGTA AACGCCCTGC GTGACAAGGC GATGAGCCAG
GATGCTGGCG CCCTGAGCGG TCAGAGCTCT ACCGACTGGT TTGCCAAATC CACCGCCCGA
ATTGACGCCC TGCGTCAGTT CGAGCGTCAA CTGTCACATC ATCTGTTAAC CGATACTCGC
AGCGCGCTTG CCAATGCCAA GTCGCTGATG GTGAGTGTCA TCGTCTTGAT GTTGGTGTCA
GGGCTTGTGG TGATCTTACT ATCTCTGTTT ATCGGACGTT ACCTGCATGC CTCTCTCAGG
CACCTCTATC ACAAGGTGAC AGAGTCGCAG AAACATTACG ATCTCAGCGT GCGGGTCGAC
CTTAAGGGTA AGGATGAGAT AGGGCAACTT GGCTCTGCAT TCAACCACAT GATGGCCGAT
TTCGAGAAGG TGATCGGCAT GGTGAGGACC AATACCCAGG GTCTGCTCAC CGCGTCTCAA
GAGATGGAAG GTTGTGCCCG CATCATGCGT GAAGATGTGG CCTTGGGTCA CAGCGAGGTG
GATCAGGTTG CCTCTGCGAT GACAGAGATG AGCGCCACGG TACAAGAGAT CGCCCAAAAT
GCGGTGCAGG CCTCTGAAGC CTCGGCCCAG GCCAACAAGG AGGCGAAGGA GGGGAGCCTG
GAGGTGGAAC GAACCGCGGA TTCCATAAAT GAGTTGGCTC AGGAGATCGC CGATGCGGCG
CAGGCCATCA ATAACCTGGA TGAAGACATT AAAGGCATAG TTGATGTGCT TGGGGTGATC
AGCGGGATCG CAGAGCAAAC CAACCTGTTG GCGCTTAATG CAGCCATCGA AGCAGCCCGC
GCCGGCGAGA TGGGCCGTGG CTTCGCCGTG GTCGCCGATG AGGTGCGCAG TTTGGCGCAA
CGGGCACAGA CCTCCACCGA AGATATTCGC AGCATGACAG AACGACTGGA ACGTGGCGCC
AAGATCGCCG TGAAGGCGAT GGAAAGCGGT CGCAACAAGG CGGAGATCAG CGTGGTAGAG
TCCAAGCGCG CCGGTGAGGA GCTTATTCGC ATCGTTAGCG AGGTGAGCGT TATCGACAGC
ATGAACGAGC AGATCGCGGC GGCAACCCAT GAGCAATCGG CGGTGTCCGA AGAGGTGAAC
CAAAACGCGA TGAAGATCAG CGACATCTAT CGTAATACCC ATGAGGTGTC CGATCGTCTC
AGCCAGCTCA ACGAGTCACT GCTTAACGAT GTGAGTGCCA TGTCTGAACT GGTGAGTAAG
TTCAAATAG
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| Protein sequence | MNMQWISDLN IKNKLLLVIV PPILGATFFG LFVVYGQYQL HQGLSQVETL SELAVVNSDF
VHELQKERGM SAGFLGSKGK SFGDKLPTQR QLSDEQLNNF KAFTASHELP KAFAQQMSQV
NQMINQLGDI RSRVDSLSIS VPEEVAYYTK LNGLLLEIVD QTSQQGASRQ IAVESASFAA
YLQMKERAGI ERAVLSSTFG NSAFKPGMFL KFVNLVSEQN TYQERFLALA TDKVNADYQQ
VVSSPTFMAV NALRDKAMSQ DAGALSGQSS TDWFAKSTAR IDALRQFERQ LSHHLLTDTR
SALANAKSLM VSVIVLMLVS GLVVILLSLF IGRYLHASLR HLYHKVTESQ KHYDLSVRVD
LKGKDEIGQL GSAFNHMMAD FEKVIGMVRT NTQGLLTASQ EMEGCARIMR EDVALGHSEV
DQVASAMTEM SATVQEIAQN AVQASEASAQ ANKEAKEGSL EVERTADSIN ELAQEIADAA
QAINNLDEDI KGIVDVLGVI SGIAEQTNLL ALNAAIEAAR AGEMGRGFAV VADEVRSLAQ
RAQTSTEDIR SMTERLERGA KIAVKAMESG RNKAEISVVE SKRAGEELIR IVSEVSVIDS
MNEQIAAATH EQSAVSEEVN QNAMKISDIY RNTHEVSDRL SQLNESLLND VSAMSELVSK
FK
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