More than 300 homologs were found in PanDaTox collection
for query gene Shew_2954 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  63.55 
 
 		 620 aa  754    Shewanella baltica OS195  Bacteria  normal  1  normal  0.35347 
 
 
-
 
NC_004347  SO_3838  methyl-accepting chemotaxis protein  62.1 
 
 		 620 aa  704    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  62.58 
 
 		 621 aa  754    Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal  1 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  61.94 
 
 		 620 aa  749    Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_008577  Shewana3_0764  methyl-accepting chemotaxis sensory transducer  62.58 
 
 		 620 aa  714    Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_0796  methyl-accepting chemotaxis sensory transducer  62.58 
 
 		 620 aa  720    Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  63.55 
 
 		 620 aa  754    Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  57.9 
 
 		 620 aa  688    Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  63.55 
 
 		 620 aa  754    Shewanella baltica OS223  Bacteria  normal  1  hitchhiker  0.00183884 
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  62.26 
 
 		 620 aa  714    Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_008322  Shewmr7_0792  methyl-accepting chemotaxis sensory transducer  61.94 
 
 		 620 aa  711    Shewanella sp. MR-7  Bacteria  normal  0.912748  normal  0.850506 
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  63.39 
 
 		 620 aa  750    Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  57.42 
 
 		 620 aa  639    Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  100 
 
 		 620 aa  1239    Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal  1 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  71.13 
 
 		 620 aa  868    Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  66.13 
 
 		 620 aa  823    Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal  1 
 
 
-
 
NC_003910  CPS_4372  methyl-accepting chemotaxis protein  44.35 
 
 		 619 aa  459  9.999999999999999e-129  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0685  methyl-accepting chemotaxis sensory transducer  40.03 
 
 		 620 aa  424  1e-117  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009456  VC0395_0606  methyl-accepting chemotaxis protein  31.66 
 
 		 587 aa  268  2e-70  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  41.19 
 
 		 541 aa  255  2.0000000000000002e-66  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  43.71 
 
 		 713 aa  251  2e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  41.76 
 
 		 541 aa  250  6e-65  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  44.44 
 
 		 716 aa  250  6e-65  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal  1 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  42.35 
 
 		 552 aa  248  2e-64  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.43301 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  46.63 
 
 		 712 aa  247  4e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  44.93 
 
 		 712 aa  247  6e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  38.25 
 
 		 541 aa  244  3e-63  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal  1 
 
 
-
 
NC_013457  VEA_000502  methyl-accepting chemotaxis protein  31 
 
 		 589 aa  243  6e-63  Vibrio sp. Ex25  Bacteria  normal  0.567249  n/a   
 
 
-
 
NC_009784  VIBHAR_05387  histidine kinase  32.08 
 
 		 589 aa  241  2e-62  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  41.82 
 
 		 552 aa  240  5e-62  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  41.74 
 
 		 553 aa  239  2e-61  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  47.08 
 
 		 679 aa  238  3e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  43.03 
 
 		 541 aa  237  4e-61  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal  1 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  47.01 
 
 		 637 aa  237  5.0000000000000005e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  40.8 
 
 		 637 aa  236  8e-61  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  40.7 
 
 		 773 aa  235  2.0000000000000002e-60  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal  1 
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  40.82 
 
 		 553 aa  234  3e-60  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  37.5 
 
 		 640 aa  234  3e-60  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.76 
 
 		 523 aa  232  2e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  39.38 
 
 		 540 aa  228  2e-58  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  38.72 
 
 		 564 aa  228  2e-58  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  40.17 
 
 		 605 aa  227  4e-58  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.88 
 
 		 636 aa  227  5.0000000000000005e-58  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  0.0451727 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  38.72 
 
 		 542 aa  226  7e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.39 
 
 		 541 aa  226  9e-58  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  35.65 
 
 		 639 aa  226  1e-57  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  36.95 
 
 		 541 aa  226  1e-57  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal  1 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  36.99 
 
 		 638 aa  225  2e-57  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  41.82 
 
 		 628 aa  225  2e-57  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  38.54 
 
 		 638 aa  224  3e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  41.71 
 
 		 629 aa  224  4e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  34.7 
 
 		 541 aa  224  4e-57  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_011313  VSAL_II0756  methyl-accepting chemotaxis protein  42.24 
 
 		 558 aa  224  4.9999999999999996e-57  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  42.05 
 
 		 634 aa  224  4.9999999999999996e-57  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  42.17 
 
 		 642 aa  223  6e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  37.88 
 
 		 619 aa  223  9e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  42.82 
 
 		 628 aa  222  9.999999999999999e-57  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  39.26 
 
 		 626 aa  222  1.9999999999999999e-56  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  38.94 
 
 		 544 aa  222  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  40.11 
 
 		 543 aa  221  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  41.55 
 
 		 411 aa  222  1.9999999999999999e-56  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  39.84 
 
 		 642 aa  222  1.9999999999999999e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  41.62 
 
 		 548 aa  221  1.9999999999999999e-56  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_009654  Mmwyl1_2301  methyl-accepting chemotaxis sensory transducer  38.05 
 
 		 632 aa  222  1.9999999999999999e-56  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  42.86 
 
 		 572 aa  222  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  37.67 
 
 		 638 aa  221  3e-56  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  41.93 
 
 		 674 aa  221  3e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  41.16 
 
 		 640 aa  221  3e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal  1 
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.55 
 
 		 545 aa  221  3.9999999999999997e-56  Shewanella baltica OS223  Bacteria  normal  1  hitchhiker  0.0000194984 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  38.04 
 
 		 653 aa  221  3.9999999999999997e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal  1 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  39.55 
 
 		 545 aa  221  3.9999999999999997e-56  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  39.69 
 
 		 552 aa  220  5e-56  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  39.69 
 
 		 552 aa  220  5e-56  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  44.67 
 
 		 647 aa  220  5e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  40.17 
 
 		 671 aa  220  6e-56  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  hitchhiker  0.0046581 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  40.37 
 
 		 554 aa  220  7e-56  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  37.89 
 
 		 638 aa  219  7.999999999999999e-56  Pseudomonas putida F1  Bacteria  normal  0.291281  normal  1 
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  39.55 
 
 		 545 aa  220  7.999999999999999e-56  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  39.55 
 
 		 545 aa  220  7.999999999999999e-56  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  39.78 
 
 		 545 aa  219  7.999999999999999e-56  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  40.57 
 
 		 497 aa  219  8.999999999999998e-56  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  41.55 
 
 		 628 aa  219  1e-55  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  40.37 
 
 		 554 aa  219  1e-55  Shewanella baltica OS195  Bacteria  normal  1  normal  0.964358 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  37.86 
 
 		 544 aa  219  1e-55  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  41.08 
 
 		 554 aa  219  1e-55  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.927661 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  44.41 
 
 		 714 aa  219  1e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  37.02 
 
 		 674 aa  219  1e-55  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  44.41 
 
 		 714 aa  219  1e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  37.22 
 
 		 638 aa  218  2e-55  Pseudomonas putida W619  Bacteria  normal  0.455391  normal  1 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  40.63 
 
 		 633 aa  218  2e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  39.28 
 
 		 662 aa  219  2e-55  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  41.06 
 
 		 548 aa  218  2e-55  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  0.0208981 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  40.11 
 
 		 554 aa  219  2e-55  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  37.75 
 
 		 640 aa  218  2.9999999999999998e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.825575 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  35.46 
 
 		 653 aa  218  2.9999999999999998e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.47 
 
 		 626 aa  218  2.9999999999999998e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  36.56 
 
 		 664 aa  218  2.9999999999999998e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal  1 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  40.79 
 
 		 554 aa  218  2.9999999999999998e-55  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.11 
 
 		 554 aa  218  2.9999999999999998e-55  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  42.56 
 
 		 554 aa  218  2.9999999999999998e-55  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
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