Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0606 |
Symbol | |
ID | 5134906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 659064 |
End bp | 660827 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640530928 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_001215445 |
Protein GI | 147672456 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTC GCCATAAACT TTATACTTTA GGCATTATTG CCATACTGGG CTCCATCGCC ATTTTCTTTA CAACCTCACA GTTTGCCCAG ACCAACGATG AACTTAATCG AGCTATCAAT CAAGTCGATA AACTGGAAGT CAGGTTACTC AATTTAAGAC GCAACGAAAA AGACTTTTTA TTGCGTAGCG ATGCCAAATA TCTGGATACC TTTCAAAAAA ATACTGACCT GTTCCTCAAT TTACAAACTG AACTCGATGC CATCATGCTC AAATATGAGC TGGGTGACTC CAACGCTTTA CGTACTGACC TACTGGAATA CAAACAGGGT TTTGAACAGT TGGTGCGTGC CTATCAAACC CTCGGCCTTA ATCCGGAAAG TGGCTTGTGG AAAAGCTACT ATCAGGCGCT CGAGCAAGCC AAACAACAAG CTTCCGCAGA AGAGCTATTA GCCCTAGTGG ATTTCCATCA GCAGGTATTA GCAGGCTCCG CCAACTCAAG CGCGTTGAAC CAATTTTCTG ACCTGATCAA ATCCGCTCAA GCCGTGGTGA ACCAGGCAAA AGTGATCGGC TTGAAATACA ACGAAGGCTT ACTGGGTGCC ACGCGTTCTC ACTCTCACGA TGTCGAAGAG ATGTTTAAAG CCTTCTCTAA AACCCTAACT CAAGCGGTTG ATGATAAACA GAAAACAATG ACCACCACTA AACTTTCAGT GACCATCGCT GTGGTGTTGA TTATTTTGTT GGTGATTTTC CAAATCAGCC GCTCAATCAA TTTACAAGTC AGTCAATTGT TGCTGGTTAT TCAACGAATT GCGCAATCTA ACGACATTTC TCTGCGCGCC GAGCTCAAAG GGAATGATGA AATCACCGCC GTGGCGCGCT ATTTCAATAG CCTGTTGGAT AAATTTGAGC ATTTGATCAG CAGTTCACAG ACCAAATCTC ACCAATTGTA CAGCAGCACT TCGAGCATGC ATGACGAGCT TGAGCAAGTG ATTGAGCAAT TTAATGTTCA ATCTGAACAC ATGGGCTTGA TGGCGACATC GGTACAACAG ATGGTATCGA CCATTAGTGA GATTTCGGAA AGCACTAACA TTGCTGTCGA TGGCGTTAAT CAGGCAGCGC GCAATGCGGA ACAAGGCCGC AGCGTGGTGG TGACTACGGT GAAAAACATT GACTTACTCT CCTCTACCCT ACAGAAAAGC CAACACTCTA TCGGCTCATT GAATGCCTTT GTTGAAAAAA TCGGTGGTGC GGTGAGCATC ATTCAAGGGA TTGCAGAACA AACTAACCTA CTCGCCTTAA ACGCCGCGAT TGAAGCCGCA CGTGCCGGTG AACAAGGACG CGGTTTTGCG GTGGTCGCCG ATGAAGTACG CTCACTCGCG ACTCGTACCC ATCAATCGAC GGAAGAGATC ACCCGCGTTG TCTCCAATAT CCAGTCACAA ATGAGTCAAG TGGTCGATGA CATTGATTTG TGTAACAACC AAGGTCAGGA AACACTAAGC GCCTCTCGTC AACTTGATGA AAGCTTGCAG CAGATCCTGC GTGACATGCA TACGATTCAA GATAACTCAC AGCGCATCGC GGCAGCGATT GAAGAACAAG GCAGTGTGAT GAACCATGTC AGTGAGTCAA TTGCTGAGCT GAACACGATT TCAGAAAACA ATATGCGCTC CGCACAGCAA TGTCTTACTG AGGTCGATAC AGTGTCACGC CAAGCCCATG CCATGGATGA AGCGGTTGCA GAGTTTCGCA CCAATCGTGA CTGA
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Protein sequence | MNIRHKLYTL GIIAILGSIA IFFTTSQFAQ TNDELNRAIN QVDKLEVRLL NLRRNEKDFL LRSDAKYLDT FQKNTDLFLN LQTELDAIML KYELGDSNAL RTDLLEYKQG FEQLVRAYQT LGLNPESGLW KSYYQALEQA KQQASAEELL ALVDFHQQVL AGSANSSALN QFSDLIKSAQ AVVNQAKVIG LKYNEGLLGA TRSHSHDVEE MFKAFSKTLT QAVDDKQKTM TTTKLSVTIA VVLIILLVIF QISRSINLQV SQLLLVIQRI AQSNDISLRA ELKGNDEITA VARYFNSLLD KFEHLISSSQ TKSHQLYSST SSMHDELEQV IEQFNVQSEH MGLMATSVQQ MVSTISEISE STNIAVDGVN QAARNAEQGR SVVVTTVKNI DLLSSTLQKS QHSIGSLNAF VEKIGGAVSI IQGIAEQTNL LALNAAIEAA RAGEQGRGFA VVADEVRSLA TRTHQSTEEI TRVVSNIQSQ MSQVVDDIDL CNNQGQETLS ASRQLDESLQ QILRDMHTIQ DNSQRIAAAI EEQGSVMNHV SESIAELNTI SENNMRSAQQ CLTEVDTVSR QAHAMDEAVA EFRTNRD
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