Gene VC0395_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0606 
Symbol 
ID5134906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp659064 
End bp660827 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content46% 
IMG OID640530928 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_001215445 
Protein GI147672456 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTC GCCATAAACT TTATACTTTA GGCATTATTG CCATACTGGG CTCCATCGCC 
ATTTTCTTTA CAACCTCACA GTTTGCCCAG ACCAACGATG AACTTAATCG AGCTATCAAT
CAAGTCGATA AACTGGAAGT CAGGTTACTC AATTTAAGAC GCAACGAAAA AGACTTTTTA
TTGCGTAGCG ATGCCAAATA TCTGGATACC TTTCAAAAAA ATACTGACCT GTTCCTCAAT
TTACAAACTG AACTCGATGC CATCATGCTC AAATATGAGC TGGGTGACTC CAACGCTTTA
CGTACTGACC TACTGGAATA CAAACAGGGT TTTGAACAGT TGGTGCGTGC CTATCAAACC
CTCGGCCTTA ATCCGGAAAG TGGCTTGTGG AAAAGCTACT ATCAGGCGCT CGAGCAAGCC
AAACAACAAG CTTCCGCAGA AGAGCTATTA GCCCTAGTGG ATTTCCATCA GCAGGTATTA
GCAGGCTCCG CCAACTCAAG CGCGTTGAAC CAATTTTCTG ACCTGATCAA ATCCGCTCAA
GCCGTGGTGA ACCAGGCAAA AGTGATCGGC TTGAAATACA ACGAAGGCTT ACTGGGTGCC
ACGCGTTCTC ACTCTCACGA TGTCGAAGAG ATGTTTAAAG CCTTCTCTAA AACCCTAACT
CAAGCGGTTG ATGATAAACA GAAAACAATG ACCACCACTA AACTTTCAGT GACCATCGCT
GTGGTGTTGA TTATTTTGTT GGTGATTTTC CAAATCAGCC GCTCAATCAA TTTACAAGTC
AGTCAATTGT TGCTGGTTAT TCAACGAATT GCGCAATCTA ACGACATTTC TCTGCGCGCC
GAGCTCAAAG GGAATGATGA AATCACCGCC GTGGCGCGCT ATTTCAATAG CCTGTTGGAT
AAATTTGAGC ATTTGATCAG CAGTTCACAG ACCAAATCTC ACCAATTGTA CAGCAGCACT
TCGAGCATGC ATGACGAGCT TGAGCAAGTG ATTGAGCAAT TTAATGTTCA ATCTGAACAC
ATGGGCTTGA TGGCGACATC GGTACAACAG ATGGTATCGA CCATTAGTGA GATTTCGGAA
AGCACTAACA TTGCTGTCGA TGGCGTTAAT CAGGCAGCGC GCAATGCGGA ACAAGGCCGC
AGCGTGGTGG TGACTACGGT GAAAAACATT GACTTACTCT CCTCTACCCT ACAGAAAAGC
CAACACTCTA TCGGCTCATT GAATGCCTTT GTTGAAAAAA TCGGTGGTGC GGTGAGCATC
ATTCAAGGGA TTGCAGAACA AACTAACCTA CTCGCCTTAA ACGCCGCGAT TGAAGCCGCA
CGTGCCGGTG AACAAGGACG CGGTTTTGCG GTGGTCGCCG ATGAAGTACG CTCACTCGCG
ACTCGTACCC ATCAATCGAC GGAAGAGATC ACCCGCGTTG TCTCCAATAT CCAGTCACAA
ATGAGTCAAG TGGTCGATGA CATTGATTTG TGTAACAACC AAGGTCAGGA AACACTAAGC
GCCTCTCGTC AACTTGATGA AAGCTTGCAG CAGATCCTGC GTGACATGCA TACGATTCAA
GATAACTCAC AGCGCATCGC GGCAGCGATT GAAGAACAAG GCAGTGTGAT GAACCATGTC
AGTGAGTCAA TTGCTGAGCT GAACACGATT TCAGAAAACA ATATGCGCTC CGCACAGCAA
TGTCTTACTG AGGTCGATAC AGTGTCACGC CAAGCCCATG CCATGGATGA AGCGGTTGCA
GAGTTTCGCA CCAATCGTGA CTGA
 
Protein sequence
MNIRHKLYTL GIIAILGSIA IFFTTSQFAQ TNDELNRAIN QVDKLEVRLL NLRRNEKDFL 
LRSDAKYLDT FQKNTDLFLN LQTELDAIML KYELGDSNAL RTDLLEYKQG FEQLVRAYQT
LGLNPESGLW KSYYQALEQA KQQASAEELL ALVDFHQQVL AGSANSSALN QFSDLIKSAQ
AVVNQAKVIG LKYNEGLLGA TRSHSHDVEE MFKAFSKTLT QAVDDKQKTM TTTKLSVTIA
VVLIILLVIF QISRSINLQV SQLLLVIQRI AQSNDISLRA ELKGNDEITA VARYFNSLLD
KFEHLISSSQ TKSHQLYSST SSMHDELEQV IEQFNVQSEH MGLMATSVQQ MVSTISEISE
STNIAVDGVN QAARNAEQGR SVVVTTVKNI DLLSSTLQKS QHSIGSLNAF VEKIGGAVSI
IQGIAEQTNL LALNAAIEAA RAGEQGRGFA VVADEVRSLA TRTHQSTEEI TRVVSNIQSQ
MSQVVDDIDL CNNQGQETLS ASRQLDESLQ QILRDMHTIQ DNSQRIAAAI EEQGSVMNHV
SESIAELNTI SENNMRSAQQ CLTEVDTVSR QAHAMDEAVA EFRTNRD