Gene Sputcn32_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0796 
Symbol 
ID5082006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp886409 
End bp888271 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content44% 
IMG OID640497922 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001182325 
Protein GI146291901 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATCC GCTCAAAGTT GTTACTCAGT GCGGCAGTAT CCATTTCGGC ATTAATTGCG 
ATGTTTGGCT TGCAACTTCA TTCTAATTCT GTCGAATCGG AGCTTTCCCA TTTGGCGCAA
AATATACTCG AATTAGAACG AGACACGCTT ATACTTCGTC GGAATGAAAA GGATTTCTTT
GTTCGTAAGG ATTTAAAGTA TGTTGAAAAT CATAAACAGG TTTATGGTCA GATAAGTCAA
TCTATCCCCG CATTGGAACA AATCTTCAAA AAATATGATG TCCCGACGCA ATCTTTAGAT
AATTTTTATC GTCACTTAAA TCAATATCAG TCAACATTTA GTGAGGTGGT AAAACTACAG
CAAGAAATAG GCTTAACCCC TCAAACGGGA CTTTACGGTA CGCTAAGGAC AGCTGTCCAT
AACGTAGAAT CATTGCTGAA GGAATATGAG CAGGCATCTC TCGCGGTTGC AATGCTGCAA
TTAAGACGTA ATGAAAAAGA TTTTATGTTA CGCCGCGAAC TCCGCTATGT GGAAACCTTT
GATACCAATA TTGTTTCATT TAACAATAGC TTGCTTTCTT CAGGCTTAGA TAGCGATATC
CAAGGTAAAA TTTCCGTTCT TATTGAACAA TATCAAAAAG ATTTCAAAGT GTTAGTTAAT
AAAGAACAAC AGCTTGGCTT AACAGAACAA GATGGGACTA TGGCGCAGAT GATTGAGGCA
AATAAGTTAA CCGAAGCAAG CGCCGAGGAG TTGCATCGTC TGGCACTTAA AGCGATTGAA
GTAGCCAAAA GCAGCAGCGT TAATCTTGGT ATGATGGTGT TTTTATTAAT AACAGCATTA
CTGTCTATTA TCACCTATCT GATTATCCGC AGTATTATCA CCCCTGTTGA GCGCATTACT
CAGGTCATTT CTCGCATCGA GCAGAGCAAG GATTTGACCT TAAGATGTGA CGCTTCGACC
CAAGATGAAC TAGGTAAGAT AGCTGAACAT TTTAATAGTA TGGTGGGGAG CTTTCAGCAG
TTGATCGAGC AAGTTATTGA GTCTGTTGCG ACCATCAATA CATCCTGTAA GCACGTATCT
GAAAATGCCA TGCTCGCCTC TGAAGGTGTA GCACAGCAGC TCAATGAAAC CGATATGGTA
GCAACAGCGA TAACTGAAAT GGGGGCAACC ATAGATGAAA TTGCCAAAAC CACTGAGCTT
GCCGCACTTA AGGCGGGTAA AACCCACGAT AATGCGCAGA GTGGTCAACT GGAAGTTGAG
CAAACCATAC ATAAGATCCA GTCTCTGGCC GAGCAGCTCA ATAGCTCTGC ATCGGTTGTG
GATGAATTAG AGCGTGACAG TGAAACGATT GGCAGTGTGC TCGATGTGAT CCGTGGCATT
GCTGAGCAAA CCAATCTCCT CGCGCTCAAT GCTGCGATTG AGGCTGCACG TGCCGGTGAG
CAAGGTCGAG GTTTTGCTGT GGTTGCTGAT GAAGTGCGTA GTCTTGCGAT GCGAACTCAA
TCATCGACTC AGGAAATCGC CAATATTATC CAAACCTTAC AGAGCCGAAC CCGTTCCATT
GTGCAGCTTA TGGATGCCAG TCAAAAGCAA GGCTCAGAAA GTGCAGAGCA GGCCGCCGCC
GCCGGTGCAC TGCTGAAACT TATCAATAAT GATGTGCGTA ATATTATGGA TATGAGCACG
CAAATTGCGG CAGCTATCGA AGAGCAGAGT ATGGTTGCCG CTGAAGTGAA CAAAAACGTC
GTCGTGATCC GTGATATTGC TGAAGAATCA TCAAAAGCGG CTGATGCTAA CGCTTCAGCA
TCCGATGAGC TTAAGGCCCA GGCTGAGTAT CTCTATCGCG CAGTAAGCAA TTTTAAAATC
TAA
 
Protein sequence
MLIRSKLLLS AAVSISALIA MFGLQLHSNS VESELSHLAQ NILELERDTL ILRRNEKDFF 
VRKDLKYVEN HKQVYGQISQ SIPALEQIFK KYDVPTQSLD NFYRHLNQYQ STFSEVVKLQ
QEIGLTPQTG LYGTLRTAVH NVESLLKEYE QASLAVAMLQ LRRNEKDFML RRELRYVETF
DTNIVSFNNS LLSSGLDSDI QGKISVLIEQ YQKDFKVLVN KEQQLGLTEQ DGTMAQMIEA
NKLTEASAEE LHRLALKAIE VAKSSSVNLG MMVFLLITAL LSIITYLIIR SIITPVERIT
QVISRIEQSK DLTLRCDAST QDELGKIAEH FNSMVGSFQQ LIEQVIESVA TINTSCKHVS
ENAMLASEGV AQQLNETDMV ATAITEMGAT IDEIAKTTEL AALKAGKTHD NAQSGQLEVE
QTIHKIQSLA EQLNSSASVV DELERDSETI GSVLDVIRGI AEQTNLLALN AAIEAARAGE
QGRGFAVVAD EVRSLAMRTQ SSTQEIANII QTLQSRTRSI VQLMDASQKQ GSESAEQAAA
AGALLKLINN DVRNIMDMST QIAAAIEEQS MVAAEVNKNV VVIRDIAEES SKAADANASA
SDELKAQAEY LYRAVSNFKI