Gene Sputcn32_0796 details

Gene Information

• Locus tag: Sputcn32_0796
• ID: 5082006
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 886409
• End bp: 888271
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640497922
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001182325
• Protein GI: 146291901
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATCC GCTCAAAGTT GTTACTCAGT GCGGCAGTAT CCATTTCGGC ATTAATTGCG 
ATGTTTGGCT TGCAACTTCA TTCTAATTCT GTCGAATCGG AGCTTTCCCA TTTGGCGCAA 
AATATACTCG AATTAGAACG AGACACGCTT ATACTTCGTC GGAATGAAAA GGATTTCTTT 
GTTCGTAAGG ATTTAAAGTA TGTTGAAAAT CATAAACAGG TTTATGGTCA GATAAGTCAA 
TCTATCCCCG CATTGGAACA AATCTTCAAA AAATATGATG TCCCGACGCA ATCTTTAGAT 
AATTTTTATC GTCACTTAAA TCAATATCAG TCAACATTTA GTGAGGTGGT AAAACTACAG 
CAAGAAATAG GCTTAACCCC TCAAACGGGA CTTTACGGTA CGCTAAGGAC AGCTGTCCAT 
AACGTAGAAT CATTGCTGAA GGAATATGAG CAGGCATCTC TCGCGGTTGC AATGCTGCAA 
TTAAGACGTA ATGAAAAAGA TTTTATGTTA CGCCGCGAAC TCCGCTATGT GGAAACCTTT 
GATACCAATA TTGTTTCATT TAACAATAGC TTGCTTTCTT CAGGCTTAGA TAGCGATATC 
CAAGGTAAAA TTTCCGTTCT TATTGAACAA TATCAAAAAG ATTTCAAAGT GTTAGTTAAT 
AAAGAACAAC AGCTTGGCTT AACAGAACAA GATGGGACTA TGGCGCAGAT GATTGAGGCA 
AATAAGTTAA CCGAAGCAAG CGCCGAGGAG TTGCATCGTC TGGCACTTAA AGCGATTGAA 
GTAGCCAAAA GCAGCAGCGT TAATCTTGGT ATGATGGTGT TTTTATTAAT AACAGCATTA 
CTGTCTATTA TCACCTATCT GATTATCCGC AGTATTATCA CCCCTGTTGA GCGCATTACT 
CAGGTCATTT CTCGCATCGA GCAGAGCAAG GATTTGACCT TAAGATGTGA CGCTTCGACC 
CAAGATGAAC TAGGTAAGAT AGCTGAACAT TTTAATAGTA TGGTGGGGAG CTTTCAGCAG 
TTGATCGAGC AAGTTATTGA GTCTGTTGCG ACCATCAATA CATCCTGTAA GCACGTATCT 
GAAAATGCCA TGCTCGCCTC TGAAGGTGTA GCACAGCAGC TCAATGAAAC CGATATGGTA 
GCAACAGCGA TAACTGAAAT GGGGGCAACC ATAGATGAAA TTGCCAAAAC CACTGAGCTT 
GCCGCACTTA AGGCGGGTAA AACCCACGAT AATGCGCAGA GTGGTCAACT GGAAGTTGAG 
CAAACCATAC ATAAGATCCA GTCTCTGGCC GAGCAGCTCA ATAGCTCTGC ATCGGTTGTG 
GATGAATTAG AGCGTGACAG TGAAACGATT GGCAGTGTGC TCGATGTGAT CCGTGGCATT 
GCTGAGCAAA CCAATCTCCT CGCGCTCAAT GCTGCGATTG AGGCTGCACG TGCCGGTGAG 
CAAGGTCGAG GTTTTGCTGT GGTTGCTGAT GAAGTGCGTA GTCTTGCGAT GCGAACTCAA 
TCATCGACTC AGGAAATCGC CAATATTATC CAAACCTTAC AGAGCCGAAC CCGTTCCATT 
GTGCAGCTTA TGGATGCCAG TCAAAAGCAA GGCTCAGAAA GTGCAGAGCA GGCCGCCGCC 
GCCGGTGCAC TGCTGAAACT TATCAATAAT GATGTGCGTA ATATTATGGA TATGAGCACG 
CAAATTGCGG CAGCTATCGA AGAGCAGAGT ATGGTTGCCG CTGAAGTGAA CAAAAACGTC 
GTCGTGATCC GTGATATTGC TGAAGAATCA TCAAAAGCGG CTGATGCTAA CGCTTCAGCA 
TCCGATGAGC TTAAGGCCCA GGCTGAGTAT CTCTATCGCG CAGTAAGCAA TTTTAAAATC 
TAA 

 

Protein sequence

MLIRSKLLLS AAVSISALIA MFGLQLHSNS VESELSHLAQ NILELERDTL ILRRNEKDFF 
VRKDLKYVEN HKQVYGQISQ SIPALEQIFK KYDVPTQSLD NFYRHLNQYQ STFSEVVKLQ 
QEIGLTPQTG LYGTLRTAVH NVESLLKEYE QASLAVAMLQ LRRNEKDFML RRELRYVETF 
DTNIVSFNNS LLSSGLDSDI QGKISVLIEQ YQKDFKVLVN KEQQLGLTEQ DGTMAQMIEA 
NKLTEASAEE LHRLALKAIE VAKSSSVNLG MMVFLLITAL LSIITYLIIR SIITPVERIT 
QVISRIEQSK DLTLRCDAST QDELGKIAEH FNSMVGSFQQ LIEQVIESVA TINTSCKHVS 
ENAMLASEGV AQQLNETDMV ATAITEMGAT IDEIAKTTEL AALKAGKTHD NAQSGQLEVE 
QTIHKIQSLA EQLNSSASVV DELERDSETI GSVLDVIRGI AEQTNLLALN AAIEAARAGE 
QGRGFAVVAD EVRSLAMRTQ SSTQEIANII QTLQSRTRSI VQLMDASQKQ GSESAEQAAA 
AGALLKLINN DVRNIMDMST QIAAAIEEQS MVAAEVNKNV VVIRDIAEES SKAADANASA 
SDELKAQAEY LYRAVSNFKI