| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0764 |
|---|
| Symbol | |
|---|
| ID | 4476975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 885489 |
|---|
| End bp | 887351 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639725300 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_868408 |
|---|
| Protein GI | 117919216 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATCC GCTCAAAGTT GTTACTCAGT GCCGCTGTAT CCGTTACGGC CTTGATTGCC
ATGTTTGGAT TGCAGCTTCA TTCAAATTCG GTTGAGTCGG AACTCTCCCA CGCAGCACAA
AGCGTTCTCG AATTGGAGCG AGATGTATTG CTACTGCGTA AAAATGAAAA GGATTTTTTT
GGTCGTAAAG ATATGCAGTA TGTTCAACTG CATGGTGAGG TACATGCCAA GATTGATGAG
TTAGTCCCGA ATCTTGAGAG TATTTTTAAA AAATACAAGG TTTCCACTGC GCCACTCGAA
AGTTTTGACC GTAACCTTAA TCAGTACCAA GTCGCCTTCA ATGAAGTCGT ACAACTGCAG
CAAGAAATTG GTTTAACGCC TAAAACGGGT CTCTACGGCA CCTTAAGAAC GGCAGTGCAC
AATGTTGAGT CCATGCTGAA GGAATACGAC CAGTTATCCC TCGAAGTTGC CATGTTGCAG
CTAAGACGCA ATGAGAAAGA CTTTATGCTG CGCCGCGAGA TGAGCTATGT CGAGACCTTC
GACTCGAATA TTGCTCAGTT CAACACAAGT CTGCGTGCAT CCAGCTTAGA TTTTGATACA
CAAAATAAAA TTGCGGCCCT AATTGAGCAA TATCAAAAGG ATTTTAAGAG CTTAGTCAAT
AAAGAGCAGC AACTGGGGCT CAGTGAAAAA GATGGCACTA TGGCGAAATT GATCGCCGCA
AACAAGTTAA CCGAGGCCAG TGCCGACGAG CTGCATAATC TTGCGTTAAA GGCGATTGAT
GATACCGAAA GCAGCAGTGT GAATATCGGG ATTTTGGTCT TCGTGATTAT CGCCCTGATC
CTTGCAGTGA TTACTTACCT TATTATCCGC AGCATTATCA CCCCGGTGGA ACGTATAACG
CAGGTGATTT CACGTATCGA AGTCAGCAAA GACTTAACCC TCAGATGCGA TGCCTCGACT
CAGGATGAGC TGGGTGAAAT TGCGCAGCAT TTCAATAGCA TGGTGGGGAG CTTTCAGCAG
CTTATCGAGC AGGTTATTGA CTCAGTCGCC ACGATTAACA CGTCCTGTAA GAGTGTGTCA
GAGAATGCAA TGCTCGCCTC CGAAGGCGTT GCTCAGCAGC TTAATGAAAC CGATATGGTG
GCGACGGCGA TTACCGAAAT GGGCGCGACC ATTGATGAAA TTGCTAAAAC GACCGAGCTT
GCGGCCCTCA AAGCGGGTAA AACCCATGAT AACGCTCAAT TAGGGCAAAC TGAGGTGGAG
CAAACCATCC TCAAGATCAG ACAATTGTCT GAACAAATTA ACAGCAGCGC CTCAGTGGTG
GATGAGCTCG AGCGTGATAG TGAAACCATT GGTAGCGTGC TCGATGTGAT CCGTGGCATT
GCGGAACAAA CCAATTTACT GGCACTCAAT GCGGCGATTG AAGCGGCCCG CGCGGGTGAA
CAAGGCCGTG GTTTTGCCGT GGTTGCCGAC GAAGTACGTA GTCTGGCGAT GCGAACTCAG
ACATCAACTC AGGAGATTGC CAATATTATT CAAACCCTGC AAAGTCGAAC CCGCGCAATA
GTGCAATTAA TGGATGCGAG CCAAAAGCAA GGCGCCGAGA GTGCCGAGCA GGCTGCGGCG
GCGGGAGAAT TGCTGAAGCT TATCAATACC GATGTGCATA ATATTATGGA TATGAGCACT
CAGATTGCTG CAGCGATTGA AGAGCAGAGC ATGGTTGCCG CCGAAGTGAA TAAGAACGTG
GTCGTTATCC GTGATATTGC TGAGGATTCT TCTCGGGCTG CCGATGCCAA TGCATCGGCT
TCGGATGAAC TTAAATCCCG CGCCGAGTAT CTAGTCAGTG CCGTGAGCCA CTTTAAGATC
TAG
|
|---|
| Protein sequence | MLIRSKLLLS AAVSVTALIA MFGLQLHSNS VESELSHAAQ SVLELERDVL LLRKNEKDFF
GRKDMQYVQL HGEVHAKIDE LVPNLESIFK KYKVSTAPLE SFDRNLNQYQ VAFNEVVQLQ
QEIGLTPKTG LYGTLRTAVH NVESMLKEYD QLSLEVAMLQ LRRNEKDFML RREMSYVETF
DSNIAQFNTS LRASSLDFDT QNKIAALIEQ YQKDFKSLVN KEQQLGLSEK DGTMAKLIAA
NKLTEASADE LHNLALKAID DTESSSVNIG ILVFVIIALI LAVITYLIIR SIITPVERIT
QVISRIEVSK DLTLRCDAST QDELGEIAQH FNSMVGSFQQ LIEQVIDSVA TINTSCKSVS
ENAMLASEGV AQQLNETDMV ATAITEMGAT IDEIAKTTEL AALKAGKTHD NAQLGQTEVE
QTILKIRQLS EQINSSASVV DELERDSETI GSVLDVIRGI AEQTNLLALN AAIEAARAGE
QGRGFAVVAD EVRSLAMRTQ TSTQEIANII QTLQSRTRAI VQLMDASQKQ GAESAEQAAA
AGELLKLINT DVHNIMDMST QIAAAIEEQS MVAAEVNKNV VVIRDIAEDS SRAADANASA
SDELKSRAEY LVSAVSHFKI
|
|---|
| |