More than 300 homologs were found in PanDaTox collection
for query gene Sfri_0847 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  58.23 
 
 
620 aa  658    Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  57.42 
 
 
620 aa  669    Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  57.28 
 
 
620 aa  668    Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  58.71 
 
 
621 aa  696    Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  57.9 
 
 
620 aa  655    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  58.23 
 
 
620 aa  657    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  56.29 
 
 
620 aa  665    Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  57.9 
 
 
620 aa  655    Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  60 
 
 
620 aa  712    Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  58.39 
 
 
620 aa  635    Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_009438  Sputcn32_0796  methyl-accepting chemotaxis sensory transducer  59.35 
 
 
620 aa  653    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  57.74 
 
 
620 aa  684    Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  100 
 
 
620 aa  1245    Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_008577  Shewana3_0764  methyl-accepting chemotaxis sensory transducer  58.11 
 
 
620 aa  634  1e-180  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3838  methyl-accepting chemotaxis protein  58.91 
 
 
620 aa  631  1e-179  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_0792  methyl-accepting chemotaxis sensory transducer  57.74 
 
 
620 aa  630  1e-179  Shewanella sp. MR-7  Bacteria  normal  0.912748  normal  0.850506 
 
 
-
 
NC_003910  CPS_4372  methyl-accepting chemotaxis protein  44.44 
 
 
619 aa  461  9.999999999999999e-129  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0685  methyl-accepting chemotaxis sensory transducer  38.69 
 
 
620 aa  412  1e-113  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  46.13 
 
 
637 aa  248  2e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  38.81 
 
 
713 aa  248  2e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
637 aa  245  9.999999999999999e-64  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  42.22 
 
 
712 aa  245  1.9999999999999999e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
552 aa  244  3.9999999999999997e-63  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
541 aa  244  5e-63  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0606  methyl-accepting chemotaxis protein  30.27 
 
 
587 aa  242  1e-62  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  41.94 
 
 
712 aa  242  1e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  41.97 
 
 
541 aa  241  2.9999999999999997e-62  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  39.39 
 
 
640 aa  240  5.999999999999999e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
543 aa  239  8e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
773 aa  239  8e-62  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
540 aa  236  9e-61  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  42.69 
 
 
674 aa  232  1e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.42 
 
 
523 aa  232  2e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
716 aa  232  2e-59  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  38.84 
 
 
541 aa  231  3e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  41.21 
 
 
638 aa  231  3e-59  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  43.01 
 
 
552 aa  231  3e-59  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.88 
 
 
636 aa  230  6e-59  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_013457  VEA_000502  methyl-accepting chemotaxis protein  30.76 
 
 
589 aa  229  1e-58  Vibrio sp. Ex25  Bacteria  normal  0.567249  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  30.96 
 
 
640 aa  229  1e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  39.15 
 
 
541 aa  229  2e-58  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  40.86 
 
 
634 aa  228  3e-58  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  39.14 
 
 
619 aa  228  4e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  41.97 
 
 
639 aa  227  6e-58  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
640 aa  226  7e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  42.77 
 
 
629 aa  226  8e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  39.44 
 
 
553 aa  225  2e-57  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  41.03 
 
 
633 aa  225  2e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  39.69 
 
 
638 aa  225  2e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  39.07 
 
 
642 aa  224  3e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  40.96 
 
 
544 aa  224  3e-57  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  41.69 
 
 
564 aa  224  3e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  36.68 
 
 
542 aa  224  3e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  39.07 
 
 
541 aa  224  4e-57  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  34.17 
 
 
553 aa  224  4.9999999999999996e-57  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  38.61 
 
 
605 aa  223  7e-57  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  39.41 
 
 
662 aa  222  9.999999999999999e-57  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  42.37 
 
 
634 aa  222  9.999999999999999e-57  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05387  histidine kinase  29.7 
 
 
589 aa  223  9.999999999999999e-57  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  40.5 
 
 
541 aa  222  9.999999999999999e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  41.53 
 
 
634 aa  221  1.9999999999999999e-56  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  32.91 
 
 
522 aa  221  3e-56  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  40.85 
 
 
541 aa  221  3e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  39.94 
 
 
546 aa  221  3.9999999999999997e-56  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  36.45 
 
 
548 aa  220  5e-56  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  43.82 
 
 
679 aa  220  6e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  30.43 
 
 
642 aa  219  7.999999999999999e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_008463  PA14_27000  putative chemotaxis transducer  43.07 
 
 
490 aa  219  7.999999999999999e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
653 aa  219  1e-55  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  36.03 
 
 
647 aa  218  2.9999999999999998e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
541 aa  218  2.9999999999999998e-55  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  38.64 
 
 
541 aa  218  2.9999999999999998e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  42.39 
 
 
638 aa  218  2.9999999999999998e-55  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
492 aa  218  2.9999999999999998e-55  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  41.01 
 
 
650 aa  218  2.9999999999999998e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
640 aa  218  2.9999999999999998e-55  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  36.53 
 
 
548 aa  217  4e-55  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  38.38 
 
 
674 aa  217  4e-55  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  38.64 
 
 
541 aa  217  5.9999999999999996e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  38.62 
 
 
739 aa  217  5.9999999999999996e-55  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  40.52 
 
 
647 aa  216  7e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  39.89 
 
 
493 aa  216  8e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
492 aa  216  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_009654  Mmwyl1_2773  methyl-accepting chemotaxis sensory transducer  40.18 
 
 
540 aa  216  9.999999999999999e-55  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
647 aa  216  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  39.5 
 
 
626 aa  215  9.999999999999999e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
492 aa  216  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
638 aa  215  1.9999999999999998e-54  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  39.94 
 
 
554 aa  215  1.9999999999999998e-54  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
671 aa  215  1.9999999999999998e-54  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
541 aa  215  1.9999999999999998e-54  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_009656  PSPA7_2287  putative chemotaxis transducer  42.47 
 
 
490 aa  215  1.9999999999999998e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0436901  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
568 aa  215  1.9999999999999998e-54  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
554 aa  215  1.9999999999999998e-54  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  40.77 
 
 
624 aa  215  1.9999999999999998e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
552 aa  214  2.9999999999999995e-54  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  40.27 
 
 
640 aa  214  2.9999999999999995e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
552 aa  214  2.9999999999999995e-54  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
638 aa  214  2.9999999999999995e-54  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  37.54 
 
 
569 aa  214  2.9999999999999995e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>