| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3725 |
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| Symbol | |
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| ID | 6118074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4538920 |
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| End bp | 4540782 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635289 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001762080 |
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| Protein GI | 170728054 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.403145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTATCC GTCATAAATT AATGCTCAGC GCAGTGGTTT CAATTGTTGC TTTGGTGGCT
ATGTTTTCAT TACAGCAGTA CTCCAGTGGC GTTCAGCAGG AGTTATCATA TGCAGCTCAG
GGAGTGGTAA AACTAGAAAA AGAGGTATTG GGTCTTCGTA AAGATGAGAA AGATTTTTTC
GCCCGTTTAG ATGTTAGTTA TTTGGAAAAA CATAAACTTA ATGCAGACGA GATGAATAAT
GACATTAAGT ATCTAAAAGC AATCTTCGAA GACAATAGCA TTCCCGTCTC TGAGTTAAAT
GGGTTTGAAA AAAGTGTCGA GTTTTATCTT GATTCATTTC AGAGTGTCGT TGCACTTCAG
CAAGAGATAG GATTAACACC CAAAACGGGT TTATACGGCG GATTAAGAGA AGCAGTTCGC
AATGTTGAGA CCATAGTCAA AGAGTATAAA CAAGCTGAGC TGATGGTGAT CATGCTGCAG
TTAAGACGCA ATGAAAAAGA TTTTATGCTT CGCAGAAGCA TGGGGTATGT GGACAAGTTT
AATAATAATA TTCAGCTATT TGAAAGTGAG CTTAATAATT CAAGCATCGA CAATACTGGT
AAGGGGAAAG TATCTGAGTT GATGGCCAGT TATCAAAGGG ATTTTGCATT ACTGGTTGCT
AAAGAGCAGG CTCTGGGATT AACCCAAAAT GATGGCGAGA TGGGGGTGCT GCGTGATGCT
ATTAAAGCCG CAGACTCAAA CTTAGTGAGA TTAAAGGAGC AGTCACTTAC TGCCATTGCT
GACGCAGAAG AATCATCAAT CACTTTAGGC TTCGTGCTTT TCTGTGTTAT CGCTATCATT
TTGATTGCTT TTACTATTTT TGTCATTCGT AGCATCATGG AGCCAGTAAC ACGACTGAGT
ACTGCTATTT CTGATATTGA GAAAAATAAA GATTTGACGA TCCGCTGCGA TGCTGCGGCC
GACGATGAAA TCAGCCAAGT TGCAAAGCAC TTCAATAGTA TGCTGGATAG TTTTCAACGT
TTAATTGAAG AGGTGAATGA ATCAGTCGCG AGCATGACTC ACTCTTGCTC TGAGTTGTCA
TTAAACTCTG TTAAAGCCTC CGAAGGGGTG GCTCAGCAGT TAAATGAAAC CGACATGGTA
GCAACTGCGA TCACAGAGAT GGGAGCGACG ATAGACGAGA TTGCTAAGAA TACTGAGTTA
GCAGCAGAGC GCGCTGGAAA TACTCATACG AATGCCCTTG AAGGTCAACG CGGAGTTGAA
CAAACAATAG AGAAGATTCA ATCTCTGGCA GAGCAGCTCA ATAGCTCTTC GAAAGTTGTG
GGTGAACTGG AGAAAGATAG TAAAACGATT GGCAGTGTTT TGGACGTTAT CCGAGGTATT
GCCGAGCAAA CCAATCTACT TGCACTAAAT GCGGCTATTG AAGCAGCTAG AGCTGGTGAG
CAGGGAAGAG GTTTTGCTGT TGTGGCCGAT GAGGTACGTA GTCTTGCGAT GAGAACGCAA
GAGTCGACAG AGGAGATTGC AAGCATTATT GAGACCTTAC AGTCCAGAAC TCGCTCTATT
GTAGAGTTAA TGACAGCGAC TGAGAAACAA GGGGGCGAGA GTGCTGATCA AGCCGCTTCT
GCTGGCACTT TACTGGAGCA GATTAACTTA GATGTCACTA ATATTATGGA TATGAGTACT
CAGATTGCGG CTGCGATAGA GGAGCAGAGT ATGGTCGCTT CTGAGGTGAA CAAAAACGTG
GTGATTATTC GTGATATTGC ACAAGAGTCT GCAACAACAG CTAACGAGAA TGCACAAGCT
TCTGAAGAGG TTAAGGGACG TGCAGATCTG TTACATAGTG CGGTAAGCCT ATTTAAGGTC
TAA
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| Protein sequence | MLIRHKLMLS AVVSIVALVA MFSLQQYSSG VQQELSYAAQ GVVKLEKEVL GLRKDEKDFF
ARLDVSYLEK HKLNADEMNN DIKYLKAIFE DNSIPVSELN GFEKSVEFYL DSFQSVVALQ
QEIGLTPKTG LYGGLREAVR NVETIVKEYK QAELMVIMLQ LRRNEKDFML RRSMGYVDKF
NNNIQLFESE LNNSSIDNTG KGKVSELMAS YQRDFALLVA KEQALGLTQN DGEMGVLRDA
IKAADSNLVR LKEQSLTAIA DAEESSITLG FVLFCVIAII LIAFTIFVIR SIMEPVTRLS
TAISDIEKNK DLTIRCDAAA DDEISQVAKH FNSMLDSFQR LIEEVNESVA SMTHSCSELS
LNSVKASEGV AQQLNETDMV ATAITEMGAT IDEIAKNTEL AAERAGNTHT NALEGQRGVE
QTIEKIQSLA EQLNSSSKVV GELEKDSKTI GSVLDVIRGI AEQTNLLALN AAIEAARAGE
QGRGFAVVAD EVRSLAMRTQ ESTEEIASII ETLQSRTRSI VELMTATEKQ GGESADQAAS
AGTLLEQINL DVTNIMDMST QIAAAIEEQS MVASEVNKNV VIIRDIAQES ATTANENAQA
SEEVKGRADL LHSAVSLFKV
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