More than 300 homologs were found in PanDaTox collection
for query gene VC0395_0606 on replicon NC_009456
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013457  VEA_000502  methyl-accepting chemotaxis protein  60.07 
 
 
589 aa  673    Vibrio sp. Ex25  Bacteria  normal  0.567249  n/a   
 
 
-
 
NC_009784  VIBHAR_05387  histidine kinase  60.24 
 
 
589 aa  664    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0606  methyl-accepting chemotaxis protein  100 
 
 
587 aa  1181    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  31.66 
 
 
620 aa  268  2e-70  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  31.57 
 
 
620 aa  263  8.999999999999999e-69  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  31.06 
 
 
620 aa  261  2e-68  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
620 aa  258  3e-67  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  31.42 
 
 
621 aa  248  2e-64  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  30.67 
 
 
620 aa  248  2e-64  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  30.51 
 
 
620 aa  247  3e-64  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  30.51 
 
 
620 aa  245  1.9999999999999999e-63  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  30.51 
 
 
620 aa  245  1.9999999999999999e-63  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  31.15 
 
 
620 aa  241  2e-62  Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_008322  Shewmr7_0792  methyl-accepting chemotaxis sensory transducer  31.31 
 
 
620 aa  239  8e-62  Shewanella sp. MR-7  Bacteria  normal  0.912748  normal  0.850506 
 
 
-
 
NC_009654  Mmwyl1_0685  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
620 aa  239  1e-61  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0764  methyl-accepting chemotaxis sensory transducer  31.47 
 
 
620 aa  236  9e-61  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0796  methyl-accepting chemotaxis sensory transducer  30.35 
 
 
620 aa  234  3e-60  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
620 aa  233  7.000000000000001e-60  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  29.79 
 
 
620 aa  231  3e-59  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_004347  SO_3838  methyl-accepting chemotaxis protein  31.1 
 
 
620 aa  220  5e-56  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_4372  methyl-accepting chemotaxis protein  31.18 
 
 
619 aa  212  1e-53  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
605 aa  187  5e-46  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  34.59 
 
 
637 aa  187  5e-46  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  35.38 
 
 
658 aa  183  6e-45  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  33.6 
 
 
549 aa  180  5.999999999999999e-44  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
638 aa  180  7e-44  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  32.57 
 
 
541 aa  179  1e-43  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  34.67 
 
 
543 aa  178  3e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  31.23 
 
 
554 aa  178  3e-43  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  33.25 
 
 
548 aa  177  3e-43  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0331  methyl-accepting chemotaxis protein  34.67 
 
 
578 aa  175  1.9999999999999998e-42  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  29.93 
 
 
547 aa  174  2.9999999999999996e-42  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  31.81 
 
 
638 aa  174  3.9999999999999995e-42  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  35.1 
 
 
672 aa  173  5.999999999999999e-42  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
638 aa  173  7.999999999999999e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  33.84 
 
 
572 aa  173  7.999999999999999e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  33.52 
 
 
639 aa  173  9e-42  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  33.62 
 
 
638 aa  172  1e-41  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  30.86 
 
 
554 aa  173  1e-41  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
554 aa  172  2e-41  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  34.16 
 
 
662 aa  171  3e-41  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  33.63 
 
 
546 aa  171  3e-41  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  31.51 
 
 
545 aa  171  3e-41  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  34.71 
 
 
545 aa  171  4e-41  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  32.51 
 
 
666 aa  171  4e-41  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  32.95 
 
 
552 aa  170  5e-41  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  36.62 
 
 
549 aa  170  6e-41  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
552 aa  170  7e-41  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  30.86 
 
 
554 aa  170  7e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  38.16 
 
 
540 aa  169  9e-41  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  33.54 
 
 
533 aa  168  2e-40  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  30.38 
 
 
554 aa  168  2e-40  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  30.26 
 
 
773 aa  169  2e-40  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  30.37 
 
 
554 aa  168  2e-40  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_010506  Swoo_3576  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
772 aa  167  2.9999999999999998e-40  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0207298 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  30.69 
 
 
554 aa  168  2.9999999999999998e-40  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  29.26 
 
 
553 aa  168  2.9999999999999998e-40  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  30.08 
 
 
558 aa  168  2.9999999999999998e-40  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  30.13 
 
 
554 aa  167  4e-40  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.13 
 
 
554 aa  167  5e-40  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  31.43 
 
 
549 aa  167  5.9999999999999996e-40  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  29.38 
 
 
554 aa  167  6.9999999999999995e-40  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  34.55 
 
 
573 aa  166  9e-40  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
554 aa  166  1.0000000000000001e-39  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  32.73 
 
 
637 aa  166  1.0000000000000001e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  29.87 
 
 
554 aa  166  1.0000000000000001e-39  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  34.6 
 
 
548 aa  166  1.0000000000000001e-39  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  30.71 
 
 
544 aa  165  2.0000000000000002e-39  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  30.55 
 
 
673 aa  165  2.0000000000000002e-39  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
650 aa  165  2.0000000000000002e-39  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  31.21 
 
 
547 aa  165  2.0000000000000002e-39  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
638 aa  165  2.0000000000000002e-39  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  34.08 
 
 
544 aa  165  2.0000000000000002e-39  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
638 aa  166  2.0000000000000002e-39  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
638 aa  166  2.0000000000000002e-39  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  34.4 
 
 
573 aa  164  3e-39  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  30.19 
 
 
541 aa  164  3e-39  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  33.81 
 
 
553 aa  164  3e-39  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  36.96 
 
 
548 aa  164  3e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.43 
 
 
546 aa  164  4.0000000000000004e-39  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013456  VEA_004004  methyl-accepting chemotaxis protein  30.4 
 
 
663 aa  164  4.0000000000000004e-39  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  32.54 
 
 
545 aa  164  5.0000000000000005e-39  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  32.38 
 
 
642 aa  164  5.0000000000000005e-39  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  30.13 
 
 
554 aa  164  5.0000000000000005e-39  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  35.37 
 
 
673 aa  164  6e-39  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  30.84 
 
 
636 aa  164  6e-39  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1488  methyl-accepting chemotaxis protein  32.28 
 
 
672 aa  163  7e-39  Vibrio cholerae O395  Bacteria  normal  0.619219  n/a   
 
 
-
 
NC_008700  Sama_0767  putative methyl-accepting chemotaxis sensory transducer  30.47 
 
 
546 aa  163  7e-39  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  33.15 
 
 
642 aa  163  7e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
638 aa  163  7e-39  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  32.31 
 
 
564 aa  163  7e-39  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  31.3 
 
 
547 aa  163  8.000000000000001e-39  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
411 aa  163  8.000000000000001e-39  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  29.05 
 
 
539 aa  163  9e-39  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
661 aa  162  1e-38  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
545 aa  162  1e-38  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  32.38 
 
 
638 aa  162  1e-38  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  32.95 
 
 
629 aa  163  1e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
545 aa  163  1e-38  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  33.15 
 
 
642 aa  162  1e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
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