More than 300 homologs were found in PanDaTox collection
for query gene Gbem_1884 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  100 
 
 
547 aa  1100    Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  91.96 
 
 
547 aa  1011    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  55.58 
 
 
549 aa  573  1.0000000000000001e-162  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  56.02 
 
 
549 aa  538  1e-151  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_007517  Gmet_0712  methyl-accepting chemotaxis sensory transducer  56.75 
 
 
550 aa  536  1e-151  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0756  methyl-accepting chemotaxis protein  52.19 
 
 
549 aa  498  1e-139  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  48.99 
 
 
674 aa  454  1.0000000000000001e-126  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  49.37 
 
 
540 aa  441  9.999999999999999e-123  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  66.76 
 
 
547 aa  430  1e-119  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  48.81 
 
 
540 aa  430  1e-119  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  51.52 
 
 
543 aa  428  1e-118  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  52.09 
 
 
545 aa  421  1e-116  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  53.23 
 
 
549 aa  416  9.999999999999999e-116  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  46.35 
 
 
540 aa  416  9.999999999999999e-116  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  46.85 
 
 
557 aa  414  1e-114  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2942  methyl-accepting chemotaxis protein  47.54 
 
 
544 aa  405  1.0000000000000001e-112  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  45.75 
 
 
549 aa  407  1.0000000000000001e-112  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  44.04 
 
 
550 aa  390  1e-107  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  44.26 
 
 
542 aa  384  1e-105  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3876  methyl-accepting chemotaxis sensory transducer  58.22 
 
 
535 aa  383  1e-105  Geobacter bemidjiensis Bem  Bacteria  normal  0.74566  n/a   
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  44 
 
 
544 aa  380  1e-104  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_012918  GM21_3964  methyl-accepting chemotaxis sensory transducer  63.22 
 
 
535 aa  380  1e-104  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000408371 
 
 
-
 
NC_007517  Gmet_0529  methyl-accepting chemotaxis sensory transducer  58.18 
 
 
544 aa  380  1e-104  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  60.91 
 
 
540 aa  379  1e-104  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  44.25 
 
 
544 aa  380  1e-104  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  61.49 
 
 
533 aa  376  1e-103  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3345  methyl-accepting chemotaxis sensory transducer  55.38 
 
 
542 aa  365  1e-99  Geobacter sp. M21  Bacteria  n/a    normal  0.0226154 
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  60.48 
 
 
661 aa  364  3e-99  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1286  methyl-accepting chemotaxis sensory transducer  56.32 
 
 
538 aa  362  9e-99  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  57.38 
 
 
549 aa  360  3e-98  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  59.34 
 
 
528 aa  358  1.9999999999999998e-97  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  54.85 
 
 
533 aa  357  2.9999999999999997e-97  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  44.32 
 
 
541 aa  357  3.9999999999999996e-97  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  53.95 
 
 
570 aa  356  5.999999999999999e-97  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  45.65 
 
 
541 aa  353  5.9999999999999994e-96  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0365  methyl-accepting chemotaxis sensory transducer  55.08 
 
 
700 aa  352  1e-95  Geobacter sp. M21  Bacteria  n/a    normal  0.0784998 
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  55.01 
 
 
539 aa  350  3e-95  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2579  methyl-accepting chemotaxis protein  45.33 
 
 
543 aa  347  3e-94  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  55.37 
 
 
700 aa  347  3e-94  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_002939  GSU1041  methyl-accepting chemotaxis protein  56.14 
 
 
541 aa  346  5e-94  Geobacter sulfurreducens PCA  Bacteria  normal  0.893443  n/a   
 
 
-
 
NC_010814  Glov_2961  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
542 aa  345  1e-93  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3045  methyl-accepting chemotaxis sensory transducer  56.86 
 
 
563 aa  345  1e-93  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000317109  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  49.25 
 
 
645 aa  344  2.9999999999999997e-93  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  48.64 
 
 
632 aa  344  2.9999999999999997e-93  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2857  methyl-accepting chemotaxis sensory transducer  54.24 
 
 
392 aa  340  5e-92  Geobacter bemidjiensis Bem  Bacteria  normal  0.0205381  n/a   
 
 
-
 
NC_010814  Glov_1891  methyl-accepting chemotaxis sensory transducer  52.51 
 
 
509 aa  340  5e-92  Geobacter lovleyi SZ  Bacteria  normal  0.745334  n/a   
 
 
-
 
NC_012918  GM21_1357  methyl-accepting chemotaxis sensory transducer  54.7 
 
 
392 aa  340  5e-92  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.9116599999999996e-27 
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  53.65 
 
 
565 aa  338  9.999999999999999e-92  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_008609  Ppro_0724  methyl-accepting chemotaxis sensory transducer  53.04 
 
 
539 aa  338  9.999999999999999e-92  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  56.38 
 
 
392 aa  337  2.9999999999999997e-91  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  45.83 
 
 
540 aa  337  2.9999999999999997e-91  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  54.71 
 
 
533 aa  335  1e-90  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0401  methyl-accepting chemotaxis protein, putative  51.85 
 
 
539 aa  335  2e-90  Geobacter sulfurreducens PCA  Bacteria  normal  0.395676  n/a   
 
 
-
 
NC_007517  Gmet_0799  methyl-accepting chemotaxis sensory transducer  54.89 
 
 
388 aa  334  2e-90  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  52.38 
 
 
546 aa  329  9e-89  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  52.38 
 
 
546 aa  328  2.0000000000000001e-88  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1021  methyl-accepting chemotaxis sensory transducer  51.55 
 
 
518 aa  326  7e-88  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  55.36 
 
 
569 aa  322  9.999999999999999e-87  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0771  methyl-accepting chemotaxis sensory transducer  55.42 
 
 
822 aa  322  9.999999999999999e-87  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1035  methyl-accepting chemotaxis protein  43.74 
 
 
549 aa  318  2e-85  Geobacter sulfurreducens PCA  Bacteria  normal  0.640997  n/a   
 
 
-
 
NC_011146  Gbem_0728  methyl-accepting chemotaxis sensory transducer  41.93 
 
 
537 aa  318  2e-85  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3058  methyl-accepting chemotaxis sensory transducer  52.12 
 
 
518 aa  317  5e-85  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0039  methyl-accepting chemotaxis sensory transducer  53.21 
 
 
515 aa  301  3e-80  Geobacter sp. M21  Bacteria  n/a    normal  0.0381098 
 
 
-
 
NC_011146  Gbem_0040  methyl-accepting chemotaxis sensory transducer  52.91 
 
 
515 aa  298  2e-79  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0882  methyl-accepting chemotaxis sensory transducer  44.85 
 
 
540 aa  294  3e-78  Geobacter lovleyi SZ  Bacteria  normal  0.566239  n/a   
 
 
-
 
NC_011146  Gbem_0809  methyl-accepting chemotaxis sensory transducer  49 
 
 
532 aa  294  3e-78  Geobacter bemidjiensis Bem  Bacteria  normal  0.826751  n/a   
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  53.8 
 
 
666 aa  293  5e-78  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_012918  GM21_3453  methyl-accepting chemotaxis sensory transducer  50.46 
 
 
532 aa  291  2e-77  Geobacter sp. M21  Bacteria  n/a    normal  0.0235494 
 
 
-
 
NC_010814  Glov_3312  methyl-accepting chemotaxis sensory transducer  49.72 
 
 
533 aa  290  4e-77  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  53.4 
 
 
658 aa  287  2.9999999999999996e-76  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2998  methyl-accepting chemotaxis sensory transducer  52.77 
 
 
549 aa  280  3e-74  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2152  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
474 aa  245  9.999999999999999e-64  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000647381  n/a   
 
 
-
 
NC_012918  GM21_2500  methyl-accepting chemotaxis sensory transducer  35.13 
 
 
557 aa  245  1.9999999999999999e-63  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  32.85 
 
 
541 aa  236  1.0000000000000001e-60  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_002939  GSU0916  methyl-accepting chemotaxis protein  39.55 
 
 
394 aa  234  3e-60  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.00484593  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  36.55 
 
 
541 aa  231  2e-59  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
637 aa  231  2e-59  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009783  VIBHAR_02691  hypothetical protein  38.7 
 
 
535 aa  228  2e-58  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  41.46 
 
 
601 aa  225  2e-57  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  35.94 
 
 
640 aa  224  4e-57  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  38.12 
 
 
541 aa  223  8e-57  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
541 aa  223  8e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  33.76 
 
 
541 aa  223  9.999999999999999e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
541 aa  222  9.999999999999999e-57  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_013501  Rmar_2177  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
628 aa  221  3e-56  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  32.72 
 
 
541 aa  220  5e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008607  Ppro_3805  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
422 aa  219  8.999999999999998e-56  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000721713  n/a   
 
 
-
 
NC_011830  Dhaf_1373  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
571 aa  218  2e-55  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  31.2 
 
 
543 aa  218  2e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0241  methyl-accepting chemotaxis sensory transducer  40.86 
 
 
393 aa  218  2e-55  Geobacter sp. M21  Bacteria  n/a    normal  0.0575576 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
573 aa  218  2e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  32.08 
 
 
541 aa  218  2.9999999999999998e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_011830  Dhaf_0529  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
573 aa  216  9.999999999999999e-55  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0116952  n/a   
 
 
-
 
NC_013456  VEA_003886  methyl-accepting chemotaxis protein  30.51 
 
 
542 aa  215  1.9999999999999998e-54  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3465  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
423 aa  215  1.9999999999999998e-54  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
646 aa  213  5.999999999999999e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
541 aa  213  5.999999999999999e-54  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_011146  Gbem_0257  methyl-accepting chemotaxis sensory transducer  40 
 
 
393 aa  213  5.999999999999999e-54  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  32.91 
 
 
541 aa  213  7e-54  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  32.91 
 
 
541 aa  213  7e-54  Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
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