Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0401 |
Symbol | |
ID | 2685789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 432601 |
End bp | 434220 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637125066 |
Product | methyl-accepting chemotaxis protein, putative |
Protein accession | NP_951460 |
Protein GI | 39995509 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.395676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTGA CGATCAAGCA GAGAATGGGG ATGACGGTAG GAGTTACCCT GCTGGGTATG GTGGTCATCA TTGTGTTCAT GGTTGTCGGC TTCACCAAGG TCCACCGACA GCAGGAGCTC ATGGACCGGC TCACCCTGAT CAATAATACG GCATTGCGCG GCAACATTGC CATGCTTAAG GCCAGGGAAT ATGAGGCCGA GTTCTTTGAC CGCAAGCAGG ACAAGTGGGT TCCGCGGGTC AAGCAAGCGG TTGACCAGGT CAACAAGGAA CTGGACGTCA TCCTCAAGAA TACGGATGAT CCAAAAATCA AGGGGTGGGC CGAAAGCGCG CGCAAGCTCG CTACCCAGTA TGTGCAGCAG TTCCAGGAGC TTGCATCCGT GGCCCTGGGA AGCAACTTCC AGGGGGCGGA ACTGGCCGAA ACCCGGGAAG AACTGCGTGA TATCCTTAAC GAGTTCGAAC CCCTGCTCGA CAATTACATT CCCAAGCAGG TGGGAGTCGC CTATCAGGCT GCCACCGAGG AGATGGACAG GAGCATTGCC GCCATCCGCC TTCAGATCTT CGGCGCCGTG CTGCTGGTGG CCGTGGCCAT GCTCGTCAGC ATTTCGTCCA CCGCCATTTA CCTTCTCAGG TCCCTTCGGT TGATCAATGA CCGTCTGCGC GACATTGCCG ACGGCGACGG CGACCTGACC AAGCGAATTG AACTCCAGTC CAGGGACGAG CTGGGAACCC TGGCCGTTTC GTTCAACAAT TTCGTGGGAA AGCTTCACGA CATTATTGCT CAGGTTTCCC AGGGCACCCT CCAGGTGGCG TCGGCTTCCT ACGAACTCCA GGCCAACGCG GAGCAAATGG CCCACGGTGC AGAGGCGGCA GCCACACAGG TGAACACCGT TGCCTCGTCC AGCGAGGTGC TGGCGGCATC AACCTTTGAG ATATCAAGCA ACTGCGGCAC TGTTGCCGAA AGCTCCCGGC GGGCCAACGA CTCCGCCCAG ACCGGTGCGG TCGTTGTCGA GAAGACTGTC GATATCATGG CCAGGATCGC CGAGCGGGTC AAAGACTCGG CCCGGACCGT GGAAAGTCTG GGTGCCCGCG GCAACCAGAT CGGAGAGATT ATTTCCACCA TCGAGGATAT CGCCGATCAG ACGAACCTGC TGGCCCTGAA CGCCGCGATC GAGGCGGCTC GGGCCGGTGA GCAGGGCCGC GGTTTTGCCG TTGTGGCGGA CGAGGTGCGG GCGCTTGCCG AGCGGACATC CCGGGCTACG CGAGAGATTT CCCAGATGAT CAAAGGGATT CAGGGCGAGA CCAGGGGGGC GGTGCTTGCC ATGGAGCAGG GGGTCAAAGA GGTGGAACTC GGCTCCGAGG AGGCCGCCCG CTCCGGCGAG GCGATACGAA CCATTCTCGA GCAGTTCCGT ACGCTCGACT GTCAGGTGGG GGAAATTTCC GCAGCTGCCG AGGACCAGAC CCGTGTCACC ACTGAAATCA GCACTAATGT CATGCAGATA ACCGAGATTA TCGAGACCAC GGCAAAGGGT GCCGCTGACT CGGCCGAGGC GGCCCAAGGG TTGGCTGAGC TTTCGGATCA GCTCAAGCAG ATCGTCGGAC GATTCAAACT CAGCGTCTGA
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Protein sequence | MQLTIKQRMG MTVGVTLLGM VVIIVFMVVG FTKVHRQQEL MDRLTLINNT ALRGNIAMLK AREYEAEFFD RKQDKWVPRV KQAVDQVNKE LDVILKNTDD PKIKGWAESA RKLATQYVQQ FQELASVALG SNFQGAELAE TREELRDILN EFEPLLDNYI PKQVGVAYQA ATEEMDRSIA AIRLQIFGAV LLVAVAMLVS ISSTAIYLLR SLRLINDRLR DIADGDGDLT KRIELQSRDE LGTLAVSFNN FVGKLHDIIA QVSQGTLQVA SASYELQANA EQMAHGAEAA ATQVNTVASS SEVLAASTFE ISSNCGTVAE SSRRANDSAQ TGAVVVEKTV DIMARIAERV KDSARTVESL GARGNQIGEI ISTIEDIADQ TNLLALNAAI EAARAGEQGR GFAVVADEVR ALAERTSRAT REISQMIKGI QGETRGAVLA MEQGVKEVEL GSEEAARSGE AIRTILEQFR TLDCQVGEIS AAAEDQTRVT TEISTNVMQI TEIIETTAKG AADSAEAAQG LAELSDQLKQ IVGRFKLSV
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