| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003886 |
|---|
| Symbol | |
|---|
| ID | 8557621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2517132 |
|---|
| End bp | 2518760 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 646406983 |
|---|
| Product | methyl-accepting chemotaxis protein |
|---|
| Protein accession | YP_003286511 |
|---|
| Protein GI | 262394657 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTA AAGACTTAAG TGTCGTAAAG AAAATATCGG TTAGTTATTT AACCGTTTTT
GCCGTGTTTG GTTTAGTGTC AGTAATGTTG GTACAAGGTT TGTTAACACT GAATAAAGAC
ATCTCAGTGC TAACGGATAA AAGCTTACCT TCTGTTGCGA TTTTGAAAGG TATCCAAGTT
GATATTACTA AAGTGCGCAA AGATGAGTTC TCTTTATTGC CAAACGCAAA TCATCCCAAA
ATTGGTGAGT GGTTAAAAGG CCTCGACCAA TGGCGTTCTG ACGTGCAGGC TGGTATTGCA
GAATACGAAA AGCTCGACCT TAATCAGCGT GAAACGCAGT CTTTTAACGT TTTTAAAGAA
ACTTGGAATC AATACATCAA GGAAACGAAG ACTTACAACG CACTGCTAAG CCAAGGTGAT
GCTGAAAGTG CAAATGATGT GATTTTATCG AGTTTCGATA CTTACTCAAA AGCGTTGAGC
AGCTTGGATG ATACCCTCGC GTTGAACGAT GAGTTGGTGA ATTTGATTGG CGAAGAAGTA
CAAAATGAAG CGGCATTTAC ACAATACAGC GCTGCTGTTG GTGCGCTTGT CGTCGCATTG
GTCATGGTGA TGTCTGCCAT GTTGCTTTCT CGAGTCATTT GCGGGCCTGT TGATCGAGCA
TTGGAATTCG CTTCTAAAAT CGCCAAGGGT CAATTGAATA ATCAAATCGA CGAAAGTGAA
TTGAGCAAAG ACGAGTTAGG AACGTTGCTC AAAGAGCTTG TCGGTATGCA AACAAACTTA
CATTCGCTGG TTTCTGAGAT TAATGACTCA ACGATTCAGC TAACGGCAGC AGTAGAGGAA
GTGAGTGCTA TTTCTTCTCA GACCGCTTCT GGTATGCAAA ATCAACAAAT TGAACTTAGC
TCGGTGGCTT CTGCGATGAC AGAAATGCAA GCTGCTGTAA GTGAAGTGGC ACAAAATACC
GAAGTTGGCG CGACCTCTGC TTACTCGGCA ACGGAAGTGG CAAAGCAAGG AACGGCGACG
TTACAACAAA CTATCGCAGT AATTGAGCGT GTATCACATA CGATCCAAGA GTCAGATGAA
CTGGCACGTG AGCTTGAATC TAGCTCAAAC AATATCAATG TGGTCGTAGA TGTGATCCGC
GGGATTGCGG AGCAAACAAA CTTGTTAGCA CTGAACGCCG CAATTGAAGC TGCTCGGGCC
GGTGAACAAG GACGTGGGTT TGCTGTTGTG GCAGATGAGG TTCGTTCTCT GGCGCAACGC
ACTCAAGACT CCACTTCACA AATTGTGGAA ATTGTTAATC AACTACAAGA GAGCAGCAGC
AAAATAGGGC ATTCAAGCCG TGATTGTCAG GAGGGCATTT CTCAGTGTGT TGAGCAAGTC
AATGACGCTG ATAGCCAGAT AAAAGAAATT GAACATTCTG TCGATAACAT AGCGCAAATG
AGCACACAAA TTGCAACGGC GTGCAGTGAG CAGAATTCAG TATCCGAAGA ACTGAATCGA
AGTGTGGAGC ATATTAATAG TGCTTCAACA GAGATGGCTG AGGGAGCTTC GCAAACGGCT
GTAGCTTGCC AGCAGATCAG TAGCCTAGCG CACAACTTGA AAACTCGAAT GGGTTCATTC
CAGCTCTAG
|
|---|
| Protein sequence | MRIKDLSVVK KISVSYLTVF AVFGLVSVML VQGLLTLNKD ISVLTDKSLP SVAILKGIQV
DITKVRKDEF SLLPNANHPK IGEWLKGLDQ WRSDVQAGIA EYEKLDLNQR ETQSFNVFKE
TWNQYIKETK TYNALLSQGD AESANDVILS SFDTYSKALS SLDDTLALND ELVNLIGEEV
QNEAAFTQYS AAVGALVVAL VMVMSAMLLS RVICGPVDRA LEFASKIAKG QLNNQIDESE
LSKDELGTLL KELVGMQTNL HSLVSEINDS TIQLTAAVEE VSAISSQTAS GMQNQQIELS
SVASAMTEMQ AAVSEVAQNT EVGATSAYSA TEVAKQGTAT LQQTIAVIER VSHTIQESDE
LARELESSSN NINVVVDVIR GIAEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRSLAQR
TQDSTSQIVE IVNQLQESSS KIGHSSRDCQ EGISQCVEQV NDADSQIKEI EHSVDNIAQM
STQIATACSE QNSVSEELNR SVEHINSAST EMAEGASQTA VACQQISSLA HNLKTRMGSF
QL
|
|---|
| |