| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2857 |
|---|
| Symbol | |
|---|
| ID | 6779709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3288071 |
|---|
| End bp | 3289249 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642768851 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002139657 |
|---|
| Protein GI | 197119230 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0205381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTT TCTTAGATGT TTATCTGCGA CTGAAAATCA AGACACGGAT ACTCTTTCTC
TCCGCCTGCT ACAGTTTCTG CATCATTGCA GCAGTCATAG TGGGGAGATC CTTCTCCGCT
TCAATCGCCA TCATCTCGAC CACAGTTTTC GTGATACTCG GCATCATCTT CAGCGCGCTC
CTTTACTGGA CGGTCAACGA CGCACTAGCC CGGATCCAGG GATATTTGGC CAAGATGACC
GAGGGAGATC TGACCCAGAA AATCGCCCCG AAACGCAACA ACGAAATCAG CACCATCATC
CGCTCCATAG GTTCGCTGCA AGACACCTTG CGGGAAATAG TCTCCCAGAT ATCCCATACC
TCCGAAGACC TCACCAAGGC TTCCCGGCAA GTACATTCCA GCGCCACGCA GATCGCTGCC
GGAACCGAAG ACGTCGCCTC CCAGACCAAC GCCGTTGCCG TGGCGAGCGA GGAGATGGCT
GCAACCTCGG GAGACATAGC GCAAAACTGC ATGAGGGCCG CTACCAACTC CAGCCAGGCG
ACGGACACCG CGCAGTCCGG AGCCAACGTC GTGCATCAGA CCCTCGAGGG GATGGAAGTG
ATAGCTGCCC GGGTAAAGGA TGCCGCCGGA ACCGTCGAAG GATTGGGGGC ACGTTCGGAT
CAGATCGGAG AAATCGTAGG GACCATCGAG GACATCGCGG ACCAGACCAA CCTGCTGGCG
CTCAATGCCG CCATCGAAGC TGCAAGGGCA GGGGAGCAGG GGCGCGGATT TGCGGTGGTG
GCCGACGAAG TGCGCGCCCT TGCGGAGCGC ACCACGCGCG CCACGCGCGA GATCGGAGAG
ATGATCAAGG CGATCCAGAC CGAGACCAGA CACGCCGTAA CGGCGATGGA AAGCAGCGTC
ACCGAGGTGG AGAAAGGGAC GGGGTACTCG AGGAAATCCG GGGAGGCCCT CGAGGAGATC
ACCGGAAAGA TCTCCGAGGT CACCATGCAG ATCAACCAGA TCGTGACGGC TGCGGAGCAG
CAGACAGCCA CCAGCGGGGA GATCTCTCGC AACGTCCAGC AGGTGACCGA GGTCATCCAG
CGCAACGCCC ATGAAACCGC CGGCGCCGTC ACCGCTGCGG CAACGCTTTC CTCTCAGGCC
GATCAACTGG AGCGCCTGGT GCGACAGTTC CACCTCTAA
|
|---|
| Protein sequence | MNIFLDVYLR LKIKTRILFL SACYSFCIIA AVIVGRSFSA SIAIISTTVF VILGIIFSAL
LYWTVNDALA RIQGYLAKMT EGDLTQKIAP KRNNEISTII RSIGSLQDTL REIVSQISHT
SEDLTKASRQ VHSSATQIAA GTEDVASQTN AVAVASEEMA ATSGDIAQNC MRAATNSSQA
TDTAQSGANV VHQTLEGMEV IAARVKDAAG TVEGLGARSD QIGEIVGTIE DIADQTNLLA
LNAAIEAARA GEQGRGFAVV ADEVRALAER TTRATREIGE MIKAIQTETR HAVTAMESSV
TEVEKGTGYS RKSGEALEEI TGKISEVTMQ INQIVTAAEQ QTATSGEISR NVQQVTEVIQ
RNAHETAGAV TAAATLSSQA DQLERLVRQF HL
|
|---|
| |