| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0882 |
|---|
| Symbol | |
|---|
| ID | 6368867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 909041 |
|---|
| End bp | 910663 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642676278 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001951126 |
|---|
| Protein GI | 189423949 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.566239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAAA TAAATATTAA AAATAAATTA TTGATAGGTT TTACAATAAT ATTCTCCGCA
ATTATTTCAA TACTTATTAT ATCTTTATTC CAGCTACACA AACTATCTGA AAACATTAAC
ACTATTGCTT ATGACGAAGC ACCTAAAATA CGTTCTATAT ACACGATAAA TAATAACATA
AAAGACATAA CGCAAGGATT AAGAAATATC ATAATTACCG ATGATATCAA TATAATGAAG
CGCGAGGCCG ATAAATTTTC TGGCATTAGC CAAGAAATAA GTAGCGCAGC CAAGGCTTTA
GAAAAAGCCG AATCATCGGC AAATGGCAAA ACAATACTTA AAGAAATGGC AAATCATGGC
CTTAAAATAG AGCTACTACA CAAAAAATGT CTTGAATATG CATTGAGCAA CGACAAGCAT
GAAGCAAAAA GCATACTTTT TTCAAAGATT GAGCCCGCCG AAAAAGAATA CTTACTTCGC
GTGAAAGCAA TGGAAGTGTT TCTATCAAAC AGATTTAATG AAACAGCAAA AAATGCAATT
TCAATATATA AATTTTCAAG CTTACTTATC ATTGGTGTTG GTGTCGTATC AATATTAATG
GGATGCATGG TTGTTTTTCT TGTTGTTATA AACATTATCA GACCGCTTAG ATCCTGTATG
CAGGCAGCAG ACAATATTGC CACTGGAGAC TTAACCATTA CTATTAATAG GCGTGCAACT
GATGAAGTTG GTCTGTTTAT GATGGCATTA GGCAAAATGG TTGAAAATTT GAAAAATATA
GTATCACAGC TAGTTAGCAC TTCGGCAAGG CTTAGTGTAT GCGCAGGACA GCTAGCAGAC
ACTTCAGGCA AAATATTAGC AGACAATGAG GAGATCGCTT GCCAATTAAA TATCTTGGCA
TCTGCAAGCA CTGAAATGGC CGCAACTTCA TCAGAGATAT CTGCGAGCTG CCTAATGGCT
GCAGACAATG CACACCAAGC AACAAATTCT GCGAAAGAGG GTGTTACCGT TATCAAGACA
AACATCGACA TTATGGCTCG TATTGTCGAG CGCGTACACA TGGCTTCAAC CACAGTCGAA
CAACTGGGGG CAAGGTCGGA TCAAATCGGA ACAATAGTGG GAACCATTGA AGATATTGCA
GATCAGACCA ACTTGTTGGC ACTTAATGCT GCTATAGAAG CTGCACGGGC CGGCGAGCAA
GGACGAGGAT TTGCTGTTGT TGCTGATGAA GTACGGGCAC TTGCTGAACG CACCACCACA
GCGACGCGAG AAATCGGAGA GATGATTAAG GCAATTCAGC AAGAAACACG CACGGCTGTT
AACTCTATGA AAGATGGATC CACAGAAGTT GAGCGTGGGA CAGAAGGAGT CAACAAATCA
AGGCGAGCGC TTGACACCAT ATTGGACGAG ATAAACTCTG TAACAACACA GATAAACCAG
ATTGCAACTG CAGCTACTGA ACAGACCGCA ACCGCTCAGG AAATTACAAA CAACATTCAA
AGGATCAGCA TGAGCTCACA GGACCGCATG CAGAATGTAC GCACCACAAA GGATTCGGCT
CATTTGCTAA CTGATCATGC CGAGAACCTG AAGTCATTGG TAAGGCAATT CAGACTGCCA
TAG
|
|---|
| Protein sequence | MLKINIKNKL LIGFTIIFSA IISILIISLF QLHKLSENIN TIAYDEAPKI RSIYTINNNI
KDITQGLRNI IITDDINIMK READKFSGIS QEISSAAKAL EKAESSANGK TILKEMANHG
LKIELLHKKC LEYALSNDKH EAKSILFSKI EPAEKEYLLR VKAMEVFLSN RFNETAKNAI
SIYKFSSLLI IGVGVVSILM GCMVVFLVVI NIIRPLRSCM QAADNIATGD LTITINRRAT
DEVGLFMMAL GKMVENLKNI VSQLVSTSAR LSVCAGQLAD TSGKILADNE EIACQLNILA
SASTEMAATS SEISASCLMA ADNAHQATNS AKEGVTVIKT NIDIMARIVE RVHMASTTVE
QLGARSDQIG TIVGTIEDIA DQTNLLALNA AIEAARAGEQ GRGFAVVADE VRALAERTTT
ATREIGEMIK AIQQETRTAV NSMKDGSTEV ERGTEGVNKS RRALDTILDE INSVTTQINQ
IATAATEQTA TAQEITNNIQ RISMSSQDRM QNVRTTKDSA HLLTDHAENL KSLVRQFRLP
|
|---|
| |