| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0040 |
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| Symbol | |
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| ID | 6782858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 49794 |
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| End bp | 51341 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642766002 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_002136867 |
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| Protein GI | 197116440 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin |
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| TIGRFAM ID | [TIGR00058] hemerythrin family non-heme iron proteins
[TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTAT TCTCTCGCGT CTTAACGATC AACTTCATTG CTGTCGCAGC CACGATTGGC
GCTGCCGTTG CCTTCGGCAG CGGGGTTGGT CTGTTCGCCG TCGGCGCCGT GATAATCCTC
CTATGCGCCG TAGCCTGCGG CCTGTCGTCA CGTGGGGAAA CCAAGGCGCT GGAGGAAATG
GCCATCGCGC TGGAAAGCGC CGCGGCGGGC AACCTTTCCT ACCGGGTGAC CGCCGCCGGC
AACGGCGAGA TAGGACGCAT AGGGTCCGCA TTCAACACCA TGATGGGCGA CTGGAACAAG
ACCATGCACC AGTTCTTCAC CGTCACCGAT CTGGTACGCG ATTCCGTCGC CCTGGTGAGC
GCGACGAACG ACGCCATGGC TGCCGCGGCC GAGGACGTCG CGCTGCAGGC CTCCACCATA
GCTACCGCCA GTGAAGAAAT GTCCGCCACC TCCGGCGACA TTGCGCGCAA CTGCCTCTAC
GCCGCCGAGA ACGCCCACAG GGCCACCGAG GAGACCACCT CCGGCGCCGA GATCGTCAGC
AACAGCGCAA GGCTCATGGA GAACATCGCC CAGCGCGTCA TGGCCACCTC CAGTTCCGTC
GCAGGGTTGG GCGAGCGTTC CGACCAGATC GGCGCCATAG CCGGGACCAT CGAGGACATC
GCCGACCAGA CGAACCTTTT GGCCCTGAAC GCGGCCATCG AGGCCGCCCG CGCCGGCGAG
ACCGGCCGCG GCTTCGCCGT CGTCGCCGAC GAAGTGCGCG CCCTGGCGGA GCGGACCACC
CGCGCCACCA AGGAGATCGA CGCCATGATC AAGTCGATCC AGACCGAGAC CAGAGCCGCC
GTCGGCTCCA TGGGAGAAGG GGTCGAGCAG GTGAACCAGG GAACCGCCGA AACCTGCCGC
TCCGGCGAGG CGCTGAACGG CATCCTCAAG ATGATCAACG ACCTGACCAT GCAGCTCTCC
CAGATCGCCA CCGCGGCGGA GGAGCAGACG GCTACCACCC ACGAGATCAC CAGCAACATC
CAGATGATTA CCAGCGTGGT CAACAGCAAC GTGGAAAGCG CCCGCGACAC CAGGGCCGCC
ACCGGCAAGC TGGTCCAGCA GGTGGACGAA CTGCACCAAT TGGTGTCGCA CTTCCAGCTC
TCCGACGCCA TGGTCTGGGA CCAGAGTTTC GCCACCAACA TCGGCACGTT CGACGATCAG
CACAAGAAGC TCTTCGCCAT GGTGAACGAA CTGAACCAGG CCATGCAGCA CAAGCGGAGC
AAGGAAGCGA TCGGCTCGGT CTTGAACCGC CTGATCGAAT ACACCGGCAG CCACTTCGCC
GCCGAGGAAG AGGCCTTCCG CAAGAGCGGC TATCCCGAGG AAGAGGCCCA CGTCAGGGCG
CACCGGGACC TGGTGCAGCA GGTTGTGGCG CTGCAGCAGA AATTCAACGC CGGCGAGACC
CTCCTTACCC ACGACGTCAT CGAATTCCTG CAGAACTGGC TGGTCAAGCA CATAAAGGGG
ACCGACGTCC GCTACACCTC CCACCTGACC AAGGCCGGAG TCCGCTAA
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| Protein sequence | MSLFSRVLTI NFIAVAATIG AAVAFGSGVG LFAVGAVIIL LCAVACGLSS RGETKALEEM
AIALESAAAG NLSYRVTAAG NGEIGRIGSA FNTMMGDWNK TMHQFFTVTD LVRDSVALVS
ATNDAMAAAA EDVALQASTI ATASEEMSAT SGDIARNCLY AAENAHRATE ETTSGAEIVS
NSARLMENIA QRVMATSSSV AGLGERSDQI GAIAGTIEDI ADQTNLLALN AAIEAARAGE
TGRGFAVVAD EVRALAERTT RATKEIDAMI KSIQTETRAA VGSMGEGVEQ VNQGTAETCR
SGEALNGILK MINDLTMQLS QIATAAEEQT ATTHEITSNI QMITSVVNSN VESARDTRAA
TGKLVQQVDE LHQLVSHFQL SDAMVWDQSF ATNIGTFDDQ HKKLFAMVNE LNQAMQHKRS
KEAIGSVLNR LIEYTGSHFA AEEEAFRKSG YPEEEAHVRA HRDLVQQVVA LQQKFNAGET
LLTHDVIEFL QNWLVKHIKG TDVRYTSHLT KAGVR
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