Gene Gbem_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0040 
Symbol 
ID6782858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp49794 
End bp51341 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content64% 
IMG OID642766002 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002136867 
Protein GI197116440 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin 
TIGRFAM ID[TIGR00058] hemerythrin family non-heme iron proteins
[TIGR02481] hemerythrin-like metal-binding domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTAT TCTCTCGCGT CTTAACGATC AACTTCATTG CTGTCGCAGC CACGATTGGC 
GCTGCCGTTG CCTTCGGCAG CGGGGTTGGT CTGTTCGCCG TCGGCGCCGT GATAATCCTC
CTATGCGCCG TAGCCTGCGG CCTGTCGTCA CGTGGGGAAA CCAAGGCGCT GGAGGAAATG
GCCATCGCGC TGGAAAGCGC CGCGGCGGGC AACCTTTCCT ACCGGGTGAC CGCCGCCGGC
AACGGCGAGA TAGGACGCAT AGGGTCCGCA TTCAACACCA TGATGGGCGA CTGGAACAAG
ACCATGCACC AGTTCTTCAC CGTCACCGAT CTGGTACGCG ATTCCGTCGC CCTGGTGAGC
GCGACGAACG ACGCCATGGC TGCCGCGGCC GAGGACGTCG CGCTGCAGGC CTCCACCATA
GCTACCGCCA GTGAAGAAAT GTCCGCCACC TCCGGCGACA TTGCGCGCAA CTGCCTCTAC
GCCGCCGAGA ACGCCCACAG GGCCACCGAG GAGACCACCT CCGGCGCCGA GATCGTCAGC
AACAGCGCAA GGCTCATGGA GAACATCGCC CAGCGCGTCA TGGCCACCTC CAGTTCCGTC
GCAGGGTTGG GCGAGCGTTC CGACCAGATC GGCGCCATAG CCGGGACCAT CGAGGACATC
GCCGACCAGA CGAACCTTTT GGCCCTGAAC GCGGCCATCG AGGCCGCCCG CGCCGGCGAG
ACCGGCCGCG GCTTCGCCGT CGTCGCCGAC GAAGTGCGCG CCCTGGCGGA GCGGACCACC
CGCGCCACCA AGGAGATCGA CGCCATGATC AAGTCGATCC AGACCGAGAC CAGAGCCGCC
GTCGGCTCCA TGGGAGAAGG GGTCGAGCAG GTGAACCAGG GAACCGCCGA AACCTGCCGC
TCCGGCGAGG CGCTGAACGG CATCCTCAAG ATGATCAACG ACCTGACCAT GCAGCTCTCC
CAGATCGCCA CCGCGGCGGA GGAGCAGACG GCTACCACCC ACGAGATCAC CAGCAACATC
CAGATGATTA CCAGCGTGGT CAACAGCAAC GTGGAAAGCG CCCGCGACAC CAGGGCCGCC
ACCGGCAAGC TGGTCCAGCA GGTGGACGAA CTGCACCAAT TGGTGTCGCA CTTCCAGCTC
TCCGACGCCA TGGTCTGGGA CCAGAGTTTC GCCACCAACA TCGGCACGTT CGACGATCAG
CACAAGAAGC TCTTCGCCAT GGTGAACGAA CTGAACCAGG CCATGCAGCA CAAGCGGAGC
AAGGAAGCGA TCGGCTCGGT CTTGAACCGC CTGATCGAAT ACACCGGCAG CCACTTCGCC
GCCGAGGAAG AGGCCTTCCG CAAGAGCGGC TATCCCGAGG AAGAGGCCCA CGTCAGGGCG
CACCGGGACC TGGTGCAGCA GGTTGTGGCG CTGCAGCAGA AATTCAACGC CGGCGAGACC
CTCCTTACCC ACGACGTCAT CGAATTCCTG CAGAACTGGC TGGTCAAGCA CATAAAGGGG
ACCGACGTCC GCTACACCTC CCACCTGACC AAGGCCGGAG TCCGCTAA
 
Protein sequence
MSLFSRVLTI NFIAVAATIG AAVAFGSGVG LFAVGAVIIL LCAVACGLSS RGETKALEEM 
AIALESAAAG NLSYRVTAAG NGEIGRIGSA FNTMMGDWNK TMHQFFTVTD LVRDSVALVS
ATNDAMAAAA EDVALQASTI ATASEEMSAT SGDIARNCLY AAENAHRATE ETTSGAEIVS
NSARLMENIA QRVMATSSSV AGLGERSDQI GAIAGTIEDI ADQTNLLALN AAIEAARAGE
TGRGFAVVAD EVRALAERTT RATKEIDAMI KSIQTETRAA VGSMGEGVEQ VNQGTAETCR
SGEALNGILK MINDLTMQLS QIATAAEEQT ATTHEITSNI QMITSVVNSN VESARDTRAA
TGKLVQQVDE LHQLVSHFQL SDAMVWDQSF ATNIGTFDDQ HKKLFAMVNE LNQAMQHKRS
KEAIGSVLNR LIEYTGSHFA AEEEAFRKSG YPEEEAHVRA HRDLVQQVVA LQQKFNAGET
LLTHDVIEFL QNWLVKHIKG TDVRYTSHLT KAGVR