| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1373 |
|---|
| Symbol | |
|---|
| ID | 7258343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1480649 |
|---|
| End bp | 1482364 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643561285 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002457865 |
|---|
| Protein GI | 219667430 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT TCCGCAATCT GAAAACAGCC TCAAAAATTA ATAGTTTAGT CCTGCTCATG
GCAGTATTTC TTGGGCTTGT AGGCTTCGTG GGGATATATT CCGCCAATAA CTTAGCTGCT
TCTTTGGAAG GTATGTATCA GGATAATTTG CTGCCAATCA AATGGCTCAA TGCAGCCCGG
GGGCAAAGCA GGGCAGTAGA GGCAATGACT CTTGAATTAT TTATCACTCA GGATCAAGAC
AGACAGCAGG AGATTCTCCA GGATGTCCAA GAGCGGGCGG CGGAAGTAGA CACCCTCCTT
AGCGATTATG GCAAGACAAC TATGGACACA TACGAACAAG AACGATTACC AAAGCTGATG
GATGAATTGC AGATATACCG GACAGAAAGA AGCAAAGCAG TGGATTTGGC ATTAGCGGGA
AAGCAGGATG AAGCCTATAC ATATTTTGCT GCTAATGCTG CTGACGACCT CGATGTTGTG
AATGCCCTTT TAGAGGAACT TGCTGATTAT AATGCCCAAA TTGCCGATGA TGAAGGGATA
AAAAGTAAGT CGTTAGCTTC AATGGTAAGC AAACTTATGA TAGGAATAAC TTTCGCCGCT
ATAGTTTTGG CTTTGGGCAT AGGTTGGTAT ATCGCCAGGA TGATTGCTAA TCCCCTGGCT
CAGTTAGTAG GAACAGTTCG CGAAATCGCC CAAGGCAACT TAGCGGTAAG AAGAATGGAT
CTTATTTCTC AAGATGAAGT TGGTCAGCTG GCTGCTGAAT TTAATACTAT GACGGACAAC
TTGCGGGTTT TAGTCAAAAA TATAGCTTAC ACTTCAGAAC AAGTAGCGGC TTCTTCAGAG
GAACTAACGG CCAGTGCCGA GCAGTCAGCC TCTGCCACGA ACCAGATTGC CGCAACAATT
ACTGATGTAG CTGCAGGAGC AACCAGGCAA GAAGCTGCTA TAGATGATAC AGCATCCATC
GTGGAGCAGA TGTCGGCAGG TGTTCAGGAG ATTGCGGCTA ATGCTAATAC TGTTTCGAGA
TCTGCTGAAA TGACTGCAAC TGCAGCTGGC CAAGGAGATA AGGCTGTGGA AGCAGCGGTG
AGCCAGATGA AAAACATTGA AATCACGGTA GCAGGTACAG CTCAGGTAGT TAGGCAATTA
GGTGAGCGAT CGAAAGAAAT CGGTCAGATA GTTGATGCGA TTTCCGGAAT TGCCGCCCAA
ACCAATCTGT TGGCACTGAA TGCGGCGATA GAGGCTGCTC GTGCCGGCGA ACAAGGCAGA
GGATTTGCCG TAGTTGCTGA GGAAGTACGC AAGCTGGCTG AGCAATCCCA GGAAGCGGCT
AAGGAAATTG CCGGCTTGAT CGCAGAAATT CAGCAGGAAA CCGGCAGTGC AGTCAATGCT
ATGCATGATG GCACCCGTGA AGTAAAGGTT GGATCTGAAG TTGTAAACTC TGCTGGACAG
GCATTTAAAG AGATTGTAAA TCTTATCGGT GAAGTTTCCA CCCAAGTCAG GGAAATTTCA
GCAGCAATTC AACAGATGGC TTCCGGAAGC CAGCAAATCG TGGATTCGAT ACGGGATATT
GAGCATATCA GCAATGAGGC ATCCAGCCAA ACTCAGACTG TCTCGGCTGC TACCGAAGAG
CAGTCCGCAT CTATGGAACA GATTGCCGCA TCCAGTCAAG CACTGGCCAA GATGGCGGAT
GAGCTCCAAA ATTCAATCGG GAAGTTTAGG GTTTAA
|
|---|
| Protein sequence | MQKFRNLKTA SKINSLVLLM AVFLGLVGFV GIYSANNLAA SLEGMYQDNL LPIKWLNAAR
GQSRAVEAMT LELFITQDQD RQQEILQDVQ ERAAEVDTLL SDYGKTTMDT YEQERLPKLM
DELQIYRTER SKAVDLALAG KQDEAYTYFA ANAADDLDVV NALLEELADY NAQIADDEGI
KSKSLASMVS KLMIGITFAA IVLALGIGWY IARMIANPLA QLVGTVREIA QGNLAVRRMD
LISQDEVGQL AAEFNTMTDN LRVLVKNIAY TSEQVAASSE ELTASAEQSA SATNQIAATI
TDVAAGATRQ EAAIDDTASI VEQMSAGVQE IAANANTVSR SAEMTATAAG QGDKAVEAAV
SQMKNIEITV AGTAQVVRQL GERSKEIGQI VDAISGIAAQ TNLLALNAAI EAARAGEQGR
GFAVVAEEVR KLAEQSQEAA KEIAGLIAEI QQETGSAVNA MHDGTREVKV GSEVVNSAGQ
AFKEIVNLIG EVSTQVREIS AAIQQMASGS QQIVDSIRDI EHISNEASSQ TQTVSAATEE
QSASMEQIAA SSQALAKMAD ELQNSIGKFR V
|
|---|
| |