Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0916 |
Symbol | |
ID | 2687168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 982110 |
End bp | 983294 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637125586 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_951970 |
Protein GI | 39996019 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00484593 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGTCAC TGTGGAACTT CTATCTCAAC TTTTCAGTAA AGGCCCGTCT TGCCACGCTC TGCGTCTGCT ACAGCGCCTG CATCGCCGCG ACGGCACTGG CCGCCCAAGC CGATTCGGCC CTTATCAAGT ACGGATCCGT GATCCTCTTT ATCGTCCTGG GGGGTATCTT CGGCTGGATC AACATCTGGT CCATCAACCG GCCGATCCAG AGGGCAATCG GTTATCTGCA AACCATGGCG CGTGGTGACC TGAGCCAGGA AATCACGGTG TTCCGGAAGA ATGAGTTCAG CAAGATGCTC CTGACCATGC GGGAGCTCCA GGGCTCCATG CGCGACATCA TCTCCGGCAT CCAGACTACG GCGGCCGATC TGTCCGCCGC CTCCGACCTG CTCCGCACCA CCTCCTCGCA GATTGCCGAA GGGACCGACC ACGCCTCCCA AGAATCGGCA TCCATCACCA CGGCGGTGGA TGAAATGGCC TCGGTGAGCC TCGCCATCTC GCACAACTGT CAGAAGATGG CAGAGGAGGC GTCGGGCACC GGCCACGCCA CCGAAAGTGG AACGGAAACC ATCTCCCGGA TGACCACTAT CATGGAGGCG GTCGAGCAGA TGGTGTCCGG CACCATGGCG GCGGTCAACG CGCTGGGCGC CAACTCCGAA CGGATCGGCG ACATCATCAC CGCCATCAGG GACATTGCCG ATCAGACCAA CCTGCTGGCG CTCAACGCCG CCATCGAGGC GGCCCGTGCC GGCGAGCAGG GACGCGGCTT CGCCGTGGTG GCCGACGAGG TGCGCAACCT CGCCGAGCGG ACGACCTCGT CCACCAGGGA AATCCAGTCC ATCATCGGCG CTCTGCAGGG CGACGTCAAA AACGTGATGG GCCTCATGGA GCAGAGCTCC GACAGTGTCC GCAACGGCAC CCGGGACATG CATCTCTCCC GCCAGGCCAT CGGGGCCATC AAGGAGCACA TTGCCCCCCT CATTGACCAC GTCTCCCAAG TGGCCATCGC GGCGGAAGAG CAGTCGGCCA CCACTGCCAG CATCACGGAG AACATCCACC GCATCGCGCT GGTGATTCGC GACGCAGCCC AGGGAGCCCA GCAGACGGAA ACCGCGGCGG CCGATCTGGC GCAGTCGGCG ACGGAACTCC AGCAGATGGT CAACCGCTTC AAGCTCTCGG CCTGA
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Protein sequence | MVSLWNFYLN FSVKARLATL CVCYSACIAA TALAAQADSA LIKYGSVILF IVLGGIFGWI NIWSINRPIQ RAIGYLQTMA RGDLSQEITV FRKNEFSKML LTMRELQGSM RDIISGIQTT AADLSAASDL LRTTSSQIAE GTDHASQESA SITTAVDEMA SVSLAISHNC QKMAEEASGT GHATESGTET ISRMTTIMEA VEQMVSGTMA AVNALGANSE RIGDIITAIR DIADQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRNLAER TTSSTREIQS IIGALQGDVK NVMGLMEQSS DSVRNGTRDM HLSRQAIGAI KEHIAPLIDH VSQVAIAAEE QSATTASITE NIHRIALVIR DAAQGAQQTE TAAADLAQSA TELQQMVNRF KLSA
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