| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3611 |
|---|
| Symbol | |
|---|
| ID | 6780475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 4127949 |
|---|
| End bp | 4129571 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642769606 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002140399 |
|---|
| Protein GI | 197119972 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGA ACTTGAGTAT CGGAACAAAA TTGGTAATCG CCTTCATAGC TATAGCCATG
ATCGGCACAG TAGTCGGTTC GGTCGGTGTG ATAAAGATAG ACCGCATCGC CAAGGACGAC
GCCACGTTGT ACAAAGGCGT CACGGTGCCG CTGGCGGACC TGGCCAACAT GTCCACTAAT
TTCCAGCGGG TCCGCATCAA CGTCAGGGAC GCGGTGGAAG CGGAAAACGA ACAGGACGCA
AAGGCGGCAC TCGATACCAT TAAGGATTTG CGCGGCAAGA TAGACGGCTC TTCCGCGGCC
TATGAGAAAA CCATATCCAC GGAGGAGGGA CGCCGGGACT ACAACGATTT CAAGCAGGCC
CGCAAGAAGT ACGTGGAGCT AACCGATAAG GTGCTCGAGC TGTCGGGCGC GGGAAAGAAG
GCTGAGGCGA TGCATCTGTT GCACGGCGAG GCGAAGAAGG CGGCGCTGTT CCAGCAGGAT
TTGATGAACC GCCTGATGCA GGCGAAGACC GACCAGGGGG AAAAGACATC CGAACATAAC
TCTGACGTCG CCAGGGCGGC TTCCCTGTTG ATGATAATCC TGGTCGTGGC TGGGGTGCTC
CTCGCCGTCG CCGGCGGCGT GTTCATCGCC AGGGCGATCA CGGTCCCGCT TAGGACCGCC
GTCTCCAAGG CGAACTCCAT CGGCGCCGGA GACCTCACGG TGGATATCCA GGCCGATTCC
ACGGACGAGA CGGGGCAGTT GCTGGCGACC CTTCGGGCCA TGGCCGCAAA TCTGCGCGGC
ATCATGGCAA AGGTCGCCGA CACCTCGGAC CAGGTGGCGG CGGCCTCCAA CCAGTTGCAC
TCAACCTCCG ACCAGATAGC AACCGGCGCG GAAGAGGTCG CCTCCCAGGC CGGTACCGTC
GCCACCGCAG GCGAGGAGAT GTCGGCCACC TCGAGCGATA TCGCCCAGAA CTGCCAGCAT
GCGGCGGAAG GGGCCAGGCG CGCTTCCCAG ACGGCGCAAA ACGGGGCCGT CGTGGTGGAG
AAGACGGTTG CCGTGATGGG GCAGATAGCC GAGAAGGTGC AGGAGACGGC CAGGACCGTG
GAGACGCTGG GAGAGCGCAG CGACCAGATC GGCGCCATCA TCGGGACCAT AGAGGACATC
GCGGACCAGA CGAACCTCCT GGCGCTGAAC GCCGCCATCG AGGCCGCGCG CGCCGGGGAG
CAGGGGCGCG GTTTTGCCGT GGTCGCCGAC GAGGTGCGGG CGCTGGCGGA GCGGACCACC
AGGGCCACCA GGGAAATCGG CGAGATGATC AAGGCCATCC AGAACCAGAC CAAGGGTGCG
GTGATCGCCA TGGAAGAAGG GGTGGAACAG GTGAAGGCCG GGACCGCGGA AGCGGCCAAG
TCGGGAAAGG CGCTGCAGGA GATCCTGGAG CAGATAAACG ACGTGGCGAT GCAGATCCAC
CAGGTGGCTA CCGCCGCCGA GGAACAGACC GCAACCACCA GCGAGATCTC CAGCAACATG
GTGCAGATAA CCGAGGTGGT GCAGCAGACT TCGCAGGGGG CGCACGAGTC GGCGCAAGCG
GCGGCAAGGC TCAGCAACAA CGCCGACGAA CTGCAGCGGC TGGTCAGGCA GTTCCGCATC
TGA
|
|---|
| Protein sequence | MFKNLSIGTK LVIAFIAIAM IGTVVGSVGV IKIDRIAKDD ATLYKGVTVP LADLANMSTN
FQRVRINVRD AVEAENEQDA KAALDTIKDL RGKIDGSSAA YEKTISTEEG RRDYNDFKQA
RKKYVELTDK VLELSGAGKK AEAMHLLHGE AKKAALFQQD LMNRLMQAKT DQGEKTSEHN
SDVARAASLL MIILVVAGVL LAVAGGVFIA RAITVPLRTA VSKANSIGAG DLTVDIQADS
TDETGQLLAT LRAMAANLRG IMAKVADTSD QVAAASNQLH STSDQIATGA EEVASQAGTV
ATAGEEMSAT SSDIAQNCQH AAEGARRASQ TAQNGAVVVE KTVAVMGQIA EKVQETARTV
ETLGERSDQI GAIIGTIEDI ADQTNLLALN AAIEAARAGE QGRGFAVVAD EVRALAERTT
RATREIGEMI KAIQNQTKGA VIAMEEGVEQ VKAGTAEAAK SGKALQEILE QINDVAMQIH
QVATAAEEQT ATTSEISSNM VQITEVVQQT SQGAHESAQA AARLSNNADE LQRLVRQFRI
|
|---|
| |