More than 300 homologs were found in PanDaTox collection
for query gene Shew_2952 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  61.18 
 
 
541 aa  652    Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009052  Sbal_1015  methyl-accepting chemotaxis sensory transducer  67.1 
 
 
541 aa  652    Shewanella baltica OS155  Bacteria  unclonable  0.0000000434326  n/a   
 
 
-
 
NC_011663  Sbal223_3274  methyl-accepting chemotaxis sensory transducer  67.28 
 
 
541 aa  654    Shewanella baltica OS223  Bacteria  normal  0.0175031  normal  0.083895 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  65.06 
 
 
541 aa  650    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  100 
 
 
541 aa  1086    Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_009997  Sbal195_1117  methyl-accepting chemotaxis sensory transducer  67.1 
 
 
541 aa  652    Shewanella baltica OS195  Bacteria  normal  0.0100073  normal  0.0339889 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  63.4 
 
 
541 aa  664    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  66.91 
 
 
541 aa  690    Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009665  Shew185_1084  methyl-accepting chemotaxis sensory transducer  67.28 
 
 
541 aa  652    Shewanella baltica OS185  Bacteria  hitchhiker  0.000100295  n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  65.12 
 
 
541 aa  687    Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  67.1 
 
 
541 aa  657    Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  66.36 
 
 
541 aa  648    Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  65.25 
 
 
541 aa  638    Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  66.36 
 
 
541 aa  648    Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  58.96 
 
 
542 aa  594  1e-168  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  36.12 
 
 
543 aa  288  1e-76  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  34.41 
 
 
541 aa  286  8e-76  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  45.18 
 
 
636 aa  264  3e-69  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  40.83 
 
 
713 aa  256  6e-67  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  42.78 
 
 
712 aa  256  1.0000000000000001e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  41.95 
 
 
637 aa  255  2.0000000000000002e-66  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  41.86 
 
 
712 aa  253  6e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  36.07 
 
 
541 aa  249  9e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  44.02 
 
 
552 aa  247  3e-64  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  42.73 
 
 
716 aa  247  4e-64  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
620 aa  247  4e-64  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  44.16 
 
 
552 aa  246  6.999999999999999e-64  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
572 aa  246  9.999999999999999e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  42.42 
 
 
640 aa  243  6e-63  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  41.78 
 
 
620 aa  242  1e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  38.99 
 
 
642 aa  241  2e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  40.38 
 
 
541 aa  241  2e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  42.38 
 
 
541 aa  241  2e-62  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
564 aa  240  4e-62  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  40.56 
 
 
773 aa  240  4e-62  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  41.14 
 
 
629 aa  240  5e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  42.39 
 
 
638 aa  239  6.999999999999999e-62  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  42.39 
 
 
638 aa  239  8e-62  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  36.95 
 
 
620 aa  239  8e-62  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  32.62 
 
 
541 aa  238  3e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  41.24 
 
 
640 aa  238  3e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  41.74 
 
 
638 aa  237  4e-61  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  42.09 
 
 
638 aa  237  4e-61  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  36.91 
 
 
541 aa  236  5.0000000000000005e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  44.35 
 
 
637 aa  236  6e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  38.36 
 
 
642 aa  236  8e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  39.42 
 
 
621 aa  235  1.0000000000000001e-60  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_008463  PA14_64920  putative methyl-accepting chemotaxis protein  33.02 
 
 
541 aa  234  2.0000000000000002e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
411 aa  234  3e-60  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  41.24 
 
 
650 aa  234  4.0000000000000004e-60  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  40.16 
 
 
647 aa  233  5e-60  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_004578  PSPTO_5569  methyl-accepting chemotaxis protein  39.94 
 
 
541 aa  233  5e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
541 aa  232  1e-59  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  42.13 
 
 
638 aa  232  1e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41 
 
 
681 aa  232  1e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  43.11 
 
 
624 aa  231  2e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  40.1 
 
 
647 aa  232  2e-59  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  39.67 
 
 
739 aa  231  3e-59  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  32.43 
 
 
541 aa  229  8e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  38.86 
 
 
573 aa  229  9e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  39.95 
 
 
638 aa  229  1e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  40.41 
 
 
647 aa  229  1e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
568 aa  228  2e-58  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  40.41 
 
 
676 aa  228  2e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  32.32 
 
 
545 aa  228  2e-58  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.94 
 
 
523 aa  228  3e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  39.01 
 
 
541 aa  228  3e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_010501  PputW619_0444  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
647 aa  227  4e-58  Pseudomonas putida W619  Bacteria  normal  0.414929  normal 
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  33.84 
 
 
547 aa  227  4e-58  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  36.12 
 
 
640 aa  227  5.0000000000000005e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
674 aa  226  6e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  38.68 
 
 
620 aa  226  8e-58  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  35.9 
 
 
546 aa  226  9e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  35.09 
 
 
546 aa  226  1e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
620 aa  224  2e-57  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  39.18 
 
 
541 aa  225  2e-57  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  40.75 
 
 
647 aa  225  2e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
634 aa  225  2e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
620 aa  224  2e-57  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  38.32 
 
 
640 aa  224  2e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  39.18 
 
 
541 aa  224  2e-57  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  44.16 
 
 
553 aa  225  2e-57  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  40.06 
 
 
539 aa  224  3e-57  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0796  methyl-accepting chemotaxis sensory transducer  40.2 
 
 
620 aa  224  4e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  38.68 
 
 
620 aa  223  6e-57  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  37.87 
 
 
544 aa  223  7e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  41.21 
 
 
548 aa  223  7e-57  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  37.82 
 
 
620 aa  223  7e-57  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
547 aa  223  7e-57  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_010002  Daci_3750  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
533 aa  223  8e-57  Delftia acidovorans SPH-1  Bacteria  normal  0.13147  normal  0.360613 
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  38.59 
 
 
493 aa  223  9e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  41.36 
 
 
666 aa  222  9.999999999999999e-57  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  38.42 
 
 
541 aa  222  1.9999999999999999e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  40.1 
 
 
620 aa  222  1.9999999999999999e-56  Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  43.59 
 
 
573 aa  221  3e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  30.38 
 
 
540 aa  221  3e-56  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
541 aa  221  3e-56  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_009654  Mmwyl1_2432  methyl-accepting chemotaxis sensory transducer  44.67 
 
 
555 aa  221  3e-56  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0013651  normal  0.119091 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  36.2 
 
 
541 aa  221  3e-56  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  33.93 
 
 
544 aa  221  3e-56  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
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