| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_64920 |
|---|
| Symbol | |
|---|
| ID | 4384838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 5786095 |
|---|
| End bp | 5787720 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639327845 |
|---|
| Product | putative methyl-accepting chemotaxis protein |
|---|
| Protein accession | YP_793383 |
|---|
| Protein GI | 116053064 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTACTG GCGTCACGGT TCGAATCCGC CTGCTGGTCC TGGCGTTGCT GCCCCTGACG
ATGCTCGTCA CGGTCATCGC GATGGCGCTG GCCAACGCCA GTCGACTCGA TGCCAGCTTC
CAGGACCTTT TCAACAACCG GATGAAGCCC ATCAGCCAGC TCAAGATCGT CGCCGACGCC
GTTGCGGTCA GCGTGGTCGA CGCCCTGCAC AAGTACCGTG CGGGCGTCTT CGATGAAGAG
CGCCTGCAGC AGGAGTTGAG TGGGGCGCTG TCGCGCATCG AGAAGTCGTG GGCCGACTAT
TCCGCAGACC ACCGGACTGC CGCCGAGAAG GAAATCATCG AGTCGCTGGT CCCCACCCTG
GAACAGGTCA AGCGGATGAC CCTGGCATAC GGCGAGCAGG CCAGGGCCGG AAGCCTGCGA
AACGTCGAGG CCGGCACGTT CAATCGCGAG ATGTATGGTG CGTTCGATCC GCTGGGAACC
GCGCTGTCGA CGCTGATCGA CCTGCAACTC AGCGAAGGCG CCAAGCTCAA CGAGCAGATG
GAGAAACGCT ACGACTCCAT GCGCACCACC TTCCTGCTCA TCGGCGCCGC AGCCCTGGTC
CTCATCGTCG CCGCGGCCTG GTTCATCAGC CTGTCGATCA TGCGCCCGCT TTCCGATCTG
CGCGGGGTGA TCCGCCGCGT GCAGGACTCC TCGAATCTCA CGCTCCGCGC CGATGCGCGC
GGGCGCGACG AAGTGTCCGA TACGGCGCGC GCCTTCAATA TGATGCTGGA AAGCCAGCAG
GCGCTGCTCC GCCATCTCGC CGAAACGGCC AGGAAGCTGA CCGTCACCTC GGACGAGATG
AGCGCCATCA GCAACCAGGT CAGCCATGTC GCCACGTCCC AAGGCGACCA GACCGACATG
GTCGCCACGG CGGTACACCA GATGAGCATG GCGGTCCAGG ACGTGGCGCG GAACGCCCAG
GCCGCCGCGG CCAGCGCGGA ATCGGCGAAC AGCGAGGCGC ACACCGGAAC CGGCCTCGTG
CATGCGAACC TCGACGCCAT CCAGGGCCTG TCGGTCATGG TCGGAGAGGC GGGAGCCGTC
ATCGACACGC TACGCAACAA GACCGATGAA ATCAGCACCG TCCTGGAAGT CATCCAGAAC
ATCGCCCAGC AGACCAACCT GCTCGCCCTC AATGCCGCGA TAGAAGCCGC ACGGGCGGGC
GAGGCCGGAC GCGGGTTCGC GGTGGTCGCC GATGAAGTGC GCAGCCTGGC CACCAATACG
CACAAGGCCA CCGAAACCAT CCGCGAGATG ATCGAAGCCC TGCAGGCAGG CGCCAGCAGC
GCGGTCAGCG TGATGCAGCA GTCACGCGAG CAGGCCCAGG TCAGCGTCCA GCGCGCCCAC
GAGGCGGGAA AGGCGCTCGG TCTCATCGCC CAGGCGATCG AAGGCATCGC CCAGAGCAAC
GCGCAGATAT CCACGGCGAC GGAAGAACAG ACCGCCACCG CGAGCGAGGT CAGCCAGAAC
ATCGACTCGC TCAATGCCAG CATCGGCGAA GTCGCCGAGG GCGCGGTGAA GACCTCCACC
TCCAGTGTCG AGCTGGCGAA GCTGGCAAAC GGGCTGGAGC AGCAGATCCA GCGCTTCACC
GTCTAG
|
|---|
| Protein sequence | MLTGVTVRIR LLVLALLPLT MLVTVIAMAL ANASRLDASF QDLFNNRMKP ISQLKIVADA
VAVSVVDALH KYRAGVFDEE RLQQELSGAL SRIEKSWADY SADHRTAAEK EIIESLVPTL
EQVKRMTLAY GEQARAGSLR NVEAGTFNRE MYGAFDPLGT ALSTLIDLQL SEGAKLNEQM
EKRYDSMRTT FLLIGAAALV LIVAAAWFIS LSIMRPLSDL RGVIRRVQDS SNLTLRADAR
GRDEVSDTAR AFNMMLESQQ ALLRHLAETA RKLTVTSDEM SAISNQVSHV ATSQGDQTDM
VATAVHQMSM AVQDVARNAQ AAAASAESAN SEAHTGTGLV HANLDAIQGL SVMVGEAGAV
IDTLRNKTDE ISTVLEVIQN IAQQTNLLAL NAAIEAARAG EAGRGFAVVA DEVRSLATNT
HKATETIREM IEALQAGASS AVSVMQQSRE QAQVSVQRAH EAGKALGLIA QAIEGIAQSN
AQISTATEEQ TATASEVSQN IDSLNASIGE VAEGAVKTST SSVELAKLAN GLEQQIQRFT
V
|
|---|
| |