Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3173 |
Symbol | |
ID | 4477773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3813267 |
End bp | 3814892 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727783 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_870803 |
Protein GI | 117921611 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0131988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGTC TACAAATAAA ACAAAAAATG TTTATCGGCA TTCTCGTGCC GCTCCTAATG CTACTGACTA TCGGTTTTAT CGCCATCAAT ATGATGGGAA AAATCGAATA TGGTGTCGAA CGCATCTATA ACGACCGAGT CGTCCCCCTT GATGATCTCA AAGTGATTGC CGATAAATAT GCCGTGGATG TGATTGATGC GGTGAACAAG GCTAATGCCG GCGGCTTTAC GGCTTCTCAG GCCATCAATG CCCTTGAAAG TGCTAAATCC ACAGTCAATC AACGCTGGCA GAAATATCTA TCAACTGAGC TTACCAAGGA AGAATCGCAA CTCGCGCAGC AAGCTGAGCG TTTATTTACT CCCGCCAATG AACAAATAGA GCAGTTAATC ACGTATCTTC GGGGATTAAA TGGCGATGTG GTGCATCAAC TGAACGACAA AATATTACCT CTGTATAACG CCATCGATCC CATCAGCGGT AAAGTCTCCG AGCTGATTGA TCTGCAAATT AAGATCGCCG GTCAGGAGAA AGATGCCGTA AACGGTATTT ACCAATCCTC TATTTCTATT TTTATCACCC TTGCGGGTAT CGCCATGCTG ATAAGCATAG TGATTGGGCT CTGGGTGAAT CGCAGCGTGA TGAATCCGAT CCGTGATATT GTTGAAAATC TTAAGACGAT ACGACAAGAC TCTGATCTCA CCGTTAAGTT TAAAACTTTC AACGACGATG AACTCGGGCA GATCTCCACT AGCCTGACCC AAGTGATTGA ACATCTGCGG GGCATTTTGC ACTCAATTGC CGAAGCCGCA AATACGGTCA ATAGTTCAGC CACTGAACTA AGTAGTTTTA CCCAAGCAAC CAATAAACGC ATGCAGCAGC AACAGGCGGA AACCGAACAA ACGGCAACGG CCATGAATGA AATGACGGCA ACTGTTGCCG AAGTGGCTCA AAGCGCCGCA GCGGCTGCAG ATTCTGCCAA GGATGCGGAT AGTTATGCCG CCAACGGTAA TCATATTGTG ATGCAATCCA TCACCAGCAT GTCGCAACTT TCGGAGCAAA TTCAGAAAAC GGCGCAAGTG ATTGGCTTTT TATCCAATGA AAGCCAAAAC ATAGGTCGGG TATTGGATGT GATCAAAAGC ATTGCCGAAC AAACCAATCT ACTGGCATTA AATGCGGCGA TTGAAGCCGC CCGCGCCGGA GAGCAAGGTC GAGGCTTTGC GGTGGTCGCC GATGAAGTCA GGACATTGGC GCAGCGCACC CAAAAATCGA CTCAAGAGAT TGAAGCTATG ATCGCCACTC TACAACAAGG TGTAAAAGAA GCGGTGAATG CAATGGAGGT CGGTATCAAT CAAGTCGATG ATGCCAACGA TAAGGCGAAT CAAGCTGGCC AAGCGTTAAA AGAGATTGTC GCCTCCGTCG ACAATATCAC CGAGTTAAAT ACTCATATCG CCACGGCTGC CGAGGAGCAA AGCAGCGTAG CCGAGAGCAT CAACCGCAGC ATTATCGCCA TCAGTGATAT TGCCGAACAC TCCACTAACT CAGCCTTAGA GTTGAGTGAA TCCGTACTTA ATCTCACAAA ACTTGCCAAC AGTATGCGTA ATCAGGTGAG TGCATTTAGG CTTTAA
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Protein sequence | MNGLQIKQKM FIGILVPLLM LLTIGFIAIN MMGKIEYGVE RIYNDRVVPL DDLKVIADKY AVDVIDAVNK ANAGGFTASQ AINALESAKS TVNQRWQKYL STELTKEESQ LAQQAERLFT PANEQIEQLI TYLRGLNGDV VHQLNDKILP LYNAIDPISG KVSELIDLQI KIAGQEKDAV NGIYQSSISI FITLAGIAML ISIVIGLWVN RSVMNPIRDI VENLKTIRQD SDLTVKFKTF NDDELGQIST SLTQVIEHLR GILHSIAEAA NTVNSSATEL SSFTQATNKR MQQQQAETEQ TATAMNEMTA TVAEVAQSAA AAADSAKDAD SYAANGNHIV MQSITSMSQL SEQIQKTAQV IGFLSNESQN IGRVLDVIKS IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRTLAQRT QKSTQEIEAM IATLQQGVKE AVNAMEVGIN QVDDANDKAN QAGQALKEIV ASVDNITELN THIATAAEEQ SSVAESINRS IIAISDIAEH STNSALELSE SVLNLTKLAN SMRNQVSAFR L
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