| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3279 |
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| Symbol | |
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| ID | 1184937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3704803 |
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| End bp | 3706428 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394629 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_793062 |
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| Protein GI | 28870443 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.149652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAC GCAAACTCAC TATCGCTCGT CGTGCCGGTC TGGGTTTTAC CCTCATTTCC
CTGTTGGTCG CATTGCTCGG CTGGTTTGCG TTGGCGCAGA TGTCGACCAT TCGCCAGAGC
GAAGTGGCCG TCGAAACCAA TTGGCTGCCA AGCATGCGAG TGGTCAATGA TATCCGTGAA
ATCATGCTGC GCATCCGGAC CATCTCCCTG CGCATGGCAC TGGACACCGA CCCTGCGAGC
ATTCCGACCT ATCGCGGGCA ACTGGACGTG CGTCTGGGCG ACCTGAACAA GAAGCTGGAC
ACCCTCAAGA CCTTCGTCGA CACCCCTGAA GAAAAGACCC TGAATGATCA GTTTCTGGTG
ACCATGGGCC AATACCGCAC GGCGCTGGAT CGCTCTTTCG TGCTGGCAGG CCAGGGCGAC
AGTGCCGGGC TGAACAAGCT GCTGCTGATC GACATGAAGC AGATTGTCGA CGGCTCCGGC
AAGCAGCTCA ATGACCTGGC CGATTTCTAT GTCACCAAGG TCGATGCCGA AGGCAAGTCG
GCCGAGGCCC AGTACGACAA ATCGCGCGAT ATCGTGATTA TCTTCGTGGC CCTCGCTGCG
CTGTGCACCA TTGGCCTGGC GCTGTGGCTG ACGCGTAGTA TCGTCAGCCC GTTGCAGCGC
GCAGTGACCG CTGCCGAGCA GGTTGCCGCA GGTGATCTGA CGCACAGCAT CGAGGTCGAC
GGCGAAGATG AAGTCACTCG CCTGTTGCGC GCCCTGGCAT TGATGCAGGG CAACTTGCGT
GACGCCATGC GTCATATCGG CAGTTCGGCC ACGCAACTGG CCTCGGCCGC CACCGAACTC
AACTCGGTCA CCGAGGACAG CTATCGCGGG CTCAACCAGC AGAACGCCGA GATCGATCAG
GCAGCCACTG CCATCAATGA AATGACTTCG GCAGTGGAAG AGGTGGCACG CAACGCAGTG
TCCACCTCGG ATGCTTCCAG CCAGTCCAGC AACTCGGCGC AGGCGGGCCA GACGCGGGTG
ATCGAGACCG TGCAGTCGAT CGAGATACTG ACCGATAACG TGCAGGCCAC TTCAACGCTG
GTGCAAAACC TGGCCAATCA GTCGCAGGAC ATTGGCAAGG TGCTGGATGT GATTCGTTCG
ATTGCCGAGC AGACCAATCT GCTGGCACTC AACGCAGCGA TCGAAGCGGC GCGCGCCGGT
GAGTCGGGGC GGGGCTTTGC GGTGGTGGCC GATGAAGTGC GGGCACTGGC GCATCGCACC
CAGCAGTCAA CGCTGGAAAT CGACTCGATG GTCAATGCCA TGCGCAGCGG TTCTGCCCAG
GCGCTGGAAT CGATGAACAC CAGCCGCGAG CGCGCCAGCT CGACATTGTC GCTGGCCAAG
GGCGCAGGCG AATCGCTGAG TGAAATTACT TCATCGATCA ATCAGATTTC CGAGCGCAAT
CTGGTGATTG CCAGCGCGGC TGAAGAGCAG GCGCAAGTGT CGCGTGAAGT TGACCGCAAC
ATCGTCAATA TTCGTGATCT GTCCATGCAA TCGACCCAGG GTGCCAACCA GATCAGCGCA
TCAAGCCATG AACTGTCGCG TCTGGCAGCG GACCTGAACC AGGTGGTCTT ACGCTTCAAG
GTGTAA
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| Protein sequence | MNLRKLTIAR RAGLGFTLIS LLVALLGWFA LAQMSTIRQS EVAVETNWLP SMRVVNDIRE
IMLRIRTISL RMALDTDPAS IPTYRGQLDV RLGDLNKKLD TLKTFVDTPE EKTLNDQFLV
TMGQYRTALD RSFVLAGQGD SAGLNKLLLI DMKQIVDGSG KQLNDLADFY VTKVDAEGKS
AEAQYDKSRD IVIIFVALAA LCTIGLALWL TRSIVSPLQR AVTAAEQVAA GDLTHSIEVD
GEDEVTRLLR ALALMQGNLR DAMRHIGSSA TQLASAATEL NSVTEDSYRG LNQQNAEIDQ
AATAINEMTS AVEEVARNAV STSDASSQSS NSAQAGQTRV IETVQSIEIL TDNVQATSTL
VQNLANQSQD IGKVLDVIRS IAEQTNLLAL NAAIEAARAG ESGRGFAVVA DEVRALAHRT
QQSTLEIDSM VNAMRSGSAQ ALESMNTSRE RASSTLSLAK GAGESLSEIT SSINQISERN
LVIASAAEEQ AQVSREVDRN IVNIRDLSMQ STQGANQISA SSHELSRLAA DLNQVVLRFK
V
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