Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3114 |
Symbol | |
ID | 3368635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3731745 |
End bp | 3733370 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653459 |
Product | histidine kinase, HAMP region: chemotaxis sensory transducer |
Protein accession | YP_236184 |
Protein GI | 66046343 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.860602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCTAC GCAAACTCAC TATCGCTCGT CGTGCCGGTC TGGGTTTTAC CCTTATTTCC CTGCTGGTGG CATTGCTGGG GTGGTTTGCG CTGGCGCAGA TGTCGACCAT CCGGCAGAGT GAAGTGGCGG TGGAGACCAA CTGGCTGCCC AGCATGCGAG TGGTCAACGA TATCCGCGAA ATCATGCTGC GCATTCGGAC CATTTCCTTG CGCATGGCAC TGGACACCGA TCCTGCGAGT ATTCCGACCT ACCGTGGTCA GATGGATGTG CGTCTGGGCG ATCTGGACAA GAAGCTGTCT GTCCTCAAGA CCTTTGTCGA CACCCCGGAA GAGAAGTCGC TGACCGACCA GTTCATGGTG ACCGTGGGCC AATACCGCAG TGCGCTGGAC CGTTCCTTTG CACTGGCCAG CCAGGGCGAC AGCGTCGGGC TGAACAAGCT GCTGCTGGTC GACATGAAGC AGATCGTCGA CGGTTCCGGC AAGCAACTCG GTGACCTGGC CGACTTCTAT CTCACTCAGG TCGATGCGGA AGGCAAGTCG GCCGGGGCCC AGTACGACAA GTCGCGCGAC ATCGTCATTA TCTTTGTGGT CATTGCCGCG CTGTGCACCA TCGGCCTGGC ACTCTGGCTG ACCCGCAGCA TCGTCGGCCC GCTGCAACGT GCAGTAACCG CCGCCGAGCA GGTTGCCAAC GGCGACCTGA CCCATACCAT CGAAGTCGAT GGCGAAGACG AAGTCACCCG ACTGTTGCGT GCCCTGGCGA TGATGCAGGT CAATCTGCGT GAAGCCATGC GCCACATCGG CAGTTCGGCC ACTCAACTGG CATCGGCCGC CACCGAACTC AACTCGGTTA CCGAAGACAG CTACCGCGGG CTGAACCAGC AGAATGCGGA GATCGACCAG GCCGCCACAG CGATCAACGA AATGACCTCG GCAGTCGAGG AAGTTGCGCG TAACGCCGTA TCCACGTCGG ACGCCTCCAA CCAGTCCAGT ACCTCGGCAT TGGCGGGCCA GACGCGGGTG ATCGAGACGG TGCAGTCGAT CCAGACGCTG ACCGACAACG TGCAGGCCAC CTCGACGCTG GTGCAAAACC TTGCCAATCA GTCGCAGGAC ATCGGCAAAG TGCTGGACGT GATCCGCTCG ATTGCCGAGC AGACCAACCT GTTGGCACTC AACGCCGCCA TCGAAGCGGC ACGTGCAGGC GAGTCGGGCC GTGGTTTCGC GGTGGTGGCG GACGAAGTCC GCGCATTGGC GCATCGCACC CAGCAGTCGA CGCTGGAAAT CGATTCGATG GTCAGCGCCA TGCGCAGCGG TTCAGCGCAG GCGCTCGACT CGATGAACAC CAGCCGCGCT CGGGCCGACT CGACATTGGC ACTGGCCAAG GGCGCGGGCG AGTCCTTGAG CGAAATCACC TCGTCGATCA ATCAGATCTC CGAGCGCAAT CTGGTGATTG CCAGCGCGGC GGAAGAGCAG GCGCAGGTCT CGCGTGAAGT CGACCGCAAC ATCGTCAACA TTCGCGATCT GTCCATGCAG TCGACTCAGG GTGCCAACCA GATCAGTGCG TCGAGCCATG AATTGTCGCG TCTGGCGGCC GATCTGAATC AGGTGGTCTC ACGCTTCAAG GTGTAA
|
Protein sequence | MNLRKLTIAR RAGLGFTLIS LLVALLGWFA LAQMSTIRQS EVAVETNWLP SMRVVNDIRE IMLRIRTISL RMALDTDPAS IPTYRGQMDV RLGDLDKKLS VLKTFVDTPE EKSLTDQFMV TVGQYRSALD RSFALASQGD SVGLNKLLLV DMKQIVDGSG KQLGDLADFY LTQVDAEGKS AGAQYDKSRD IVIIFVVIAA LCTIGLALWL TRSIVGPLQR AVTAAEQVAN GDLTHTIEVD GEDEVTRLLR ALAMMQVNLR EAMRHIGSSA TQLASAATEL NSVTEDSYRG LNQQNAEIDQ AATAINEMTS AVEEVARNAV STSDASNQSS TSALAGQTRV IETVQSIQTL TDNVQATSTL VQNLANQSQD IGKVLDVIRS IAEQTNLLAL NAAIEAARAG ESGRGFAVVA DEVRALAHRT QQSTLEIDSM VSAMRSGSAQ ALDSMNTSRA RADSTLALAK GAGESLSEIT SSINQISERN LVIASAAEEQ AQVSREVDRN IVNIRDLSMQ STQGANQISA SSHELSRLAA DLNQVVSRFK V
|
| |