More than 300 homologs were found in PanDaTox collection
for query gene Gbem_0040 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_0040  methyl-accepting chemotaxis sensory transducer  100 
 
 
515 aa  1040    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0039  methyl-accepting chemotaxis sensory transducer  96.7 
 
 
515 aa  995    Geobacter sp. M21  Bacteria  n/a    normal  0.0381098 
 
 
-
 
NC_010814  Glov_1021  methyl-accepting chemotaxis sensory transducer  64.09 
 
 
518 aa  640    Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3058  methyl-accepting chemotaxis sensory transducer  64.8 
 
 
518 aa  645    Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  52.34 
 
 
540 aa  308  1.0000000000000001e-82  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  52.34 
 
 
540 aa  308  2.0000000000000002e-82  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  49.04 
 
 
549 aa  306  6e-82  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  52.63 
 
 
540 aa  303  4.0000000000000003e-81  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  53.53 
 
 
547 aa  303  5.000000000000001e-81  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  52.91 
 
 
547 aa  303  7.000000000000001e-81  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
549 aa  303  7.000000000000001e-81  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_002939  GSU2942  methyl-accepting chemotaxis protein  50.43 
 
 
544 aa  300  5e-80  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  50.42 
 
 
544 aa  300  5e-80  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  50 
 
 
545 aa  298  1e-79  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  52.68 
 
 
540 aa  298  1e-79  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  50.42 
 
 
557 aa  298  2e-79  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  51.65 
 
 
547 aa  296  6e-79  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  52.73 
 
 
533 aa  295  1e-78  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  51.83 
 
 
542 aa  293  4e-78  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  49.28 
 
 
543 aa  293  7e-78  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  48.6 
 
 
550 aa  291  1e-77  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_012918  GM21_3345  methyl-accepting chemotaxis sensory transducer  50 
 
 
542 aa  291  2e-77  Geobacter sp. M21  Bacteria  n/a    normal  0.0226154 
 
 
-
 
NC_012918  GM21_3964  methyl-accepting chemotaxis sensory transducer  50.92 
 
 
535 aa  290  4e-77  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000408371 
 
 
-
 
NC_011146  Gbem_3876  methyl-accepting chemotaxis sensory transducer  50.31 
 
 
535 aa  290  5.0000000000000004e-77  Geobacter bemidjiensis Bem  Bacteria  normal  0.74566  n/a   
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  52.4 
 
 
549 aa  290  6e-77  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  51.95 
 
 
700 aa  288  1e-76  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_012918  GM21_0365  methyl-accepting chemotaxis sensory transducer  56.51 
 
 
700 aa  289  1e-76  Geobacter sp. M21  Bacteria  n/a    normal  0.0784998 
 
 
-
 
NC_010814  Glov_1286  methyl-accepting chemotaxis sensory transducer  52.41 
 
 
538 aa  287  2.9999999999999996e-76  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  46.68 
 
 
539 aa  286  5e-76  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0799  methyl-accepting chemotaxis sensory transducer  50.58 
 
 
388 aa  286  7e-76  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  51.83 
 
 
565 aa  285  1.0000000000000001e-75  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_007517  Gmet_0529  methyl-accepting chemotaxis sensory transducer  52.87 
 
 
544 aa  284  3.0000000000000004e-75  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  52.38 
 
 
528 aa  283  5.000000000000001e-75  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  52.06 
 
 
392 aa  282  1e-74  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0756  methyl-accepting chemotaxis protein  52.2 
 
 
549 aa  280  5e-74  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  49.15 
 
 
549 aa  279  8e-74  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  53.05 
 
 
661 aa  277  4e-73  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2857  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
392 aa  277  4e-73  Geobacter bemidjiensis Bem  Bacteria  normal  0.0205381  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  49.58 
 
 
645 aa  276  6e-73  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  52.09 
 
 
533 aa  276  7e-73  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  50.94 
 
 
541 aa  275  1.0000000000000001e-72  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.92 
 
 
546 aa  274  2.0000000000000002e-72  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  52.52 
 
 
549 aa  274  3e-72  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_012918  GM21_1357  methyl-accepting chemotaxis sensory transducer  46.63 
 
 
392 aa  273  4.0000000000000004e-72  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.9116599999999996e-27 
 
 
-
 
NC_008609  Ppro_0724  methyl-accepting chemotaxis sensory transducer  59.61 
 
 
539 aa  271  1e-71  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  44.6 
 
 
570 aa  268  2e-70  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  45.53 
 
 
533 aa  267  2.9999999999999995e-70  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
674 aa  267  4e-70  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  49.84 
 
 
541 aa  266  5.999999999999999e-70  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2961  methyl-accepting chemotaxis sensory transducer  48.32 
 
 
542 aa  266  7e-70  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.44 
 
 
632 aa  266  8.999999999999999e-70  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  51.44 
 
 
546 aa  265  1e-69  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  48.32 
 
 
544 aa  265  2e-69  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  45.83 
 
 
540 aa  265  2e-69  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1891  methyl-accepting chemotaxis sensory transducer  48.43 
 
 
509 aa  265  2e-69  Geobacter lovleyi SZ  Bacteria  normal  0.745334  n/a   
 
 
-
 
NC_002939  GSU2579  methyl-accepting chemotaxis protein  47.16 
 
 
543 aa  262  1e-68  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  47.08 
 
 
569 aa  261  2e-68  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0712  methyl-accepting chemotaxis sensory transducer  51.26 
 
 
550 aa  261  3e-68  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1041  methyl-accepting chemotaxis protein  46.69 
 
 
541 aa  259  6e-68  Geobacter sulfurreducens PCA  Bacteria  normal  0.893443  n/a   
 
 
-
 
NC_011146  Gbem_0771  methyl-accepting chemotaxis sensory transducer  48.08 
 
 
822 aa  258  2e-67  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3045  methyl-accepting chemotaxis sensory transducer  58.3 
 
 
563 aa  258  2e-67  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000317109  n/a   
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
666 aa  258  2e-67  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_002939  GSU0401  methyl-accepting chemotaxis protein, putative  45.51 
 
 
539 aa  249  1e-64  Geobacter sulfurreducens PCA  Bacteria  normal  0.395676  n/a   
 
 
-
 
NC_011146  Gbem_0728  methyl-accepting chemotaxis sensory transducer  45.77 
 
 
537 aa  248  2e-64  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1035  methyl-accepting chemotaxis protein  46.33 
 
 
549 aa  245  9.999999999999999e-64  Geobacter sulfurreducens PCA  Bacteria  normal  0.640997  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  40.88 
 
 
658 aa  244  1.9999999999999999e-63  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3453  methyl-accepting chemotaxis sensory transducer  47.73 
 
 
532 aa  244  1.9999999999999999e-63  Geobacter sp. M21  Bacteria  n/a    normal  0.0235494 
 
 
-
 
NC_011146  Gbem_0809  methyl-accepting chemotaxis sensory transducer  45.51 
 
 
532 aa  243  5e-63  Geobacter bemidjiensis Bem  Bacteria  normal  0.826751  n/a   
 
 
-
 
NC_010814  Glov_0882  methyl-accepting chemotaxis sensory transducer  43.94 
 
 
540 aa  240  4e-62  Geobacter lovleyi SZ  Bacteria  normal  0.566239  n/a   
 
 
-
 
NC_010814  Glov_3312  methyl-accepting chemotaxis sensory transducer  44.72 
 
 
533 aa  240  4e-62  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2814  methyl-accepting chemotaxis sensory transducer  37.91 
 
 
722 aa  236  7e-61  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2798  methyl-accepting chemotaxis sensory transducer  36.2 
 
 
689 aa  224  3e-57  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.803852 
 
 
-
 
NC_008609  Ppro_2998  methyl-accepting chemotaxis sensory transducer  45.07 
 
 
549 aa  221  3e-56  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2152  methyl-accepting chemotaxis sensory transducer  42.12 
 
 
474 aa  219  7.999999999999999e-56  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000647381  n/a   
 
 
-
 
NC_009438  Sputcn32_0776  methyl-accepting chemotaxis sensory transducer  30.26 
 
 
526 aa  215  1.9999999999999998e-54  Shewanella putrefaciens CN-32  Bacteria  normal  0.534221  n/a   
 
 
-
 
NC_008322  Shewmr7_0766  methyl-accepting chemotaxis sensory transducer  29.5 
 
 
529 aa  206  9e-52  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00205391 
 
 
-
 
NC_008321  Shewmr4_3223  methyl-accepting chemotaxis sensory transducer  29.35 
 
 
529 aa  205  1e-51  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.000000784984 
 
 
-
 
NC_008577  Shewana3_0739  methyl-accepting chemotaxis sensory transducer  28.71 
 
 
529 aa  205  2e-51  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.00129252 
 
 
-
 
NC_009052  Sbal_3564  methyl-accepting chemotaxis sensory transducer  28.69 
 
 
529 aa  203  7e-51  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0820  methyl-accepting chemotaxis sensory transducer  28.69 
 
 
529 aa  203  7e-51  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00000000219782 
 
 
-
 
NC_009665  Shew185_0795  methyl-accepting chemotaxis sensory transducer  28.69 
 
 
529 aa  203  8e-51  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0827  methyl-accepting chemotaxis sensory transducer  28.69 
 
 
529 aa  202  9e-51  Shewanella baltica OS195  Bacteria  normal  normal  0.456094 
 
 
-
 
NC_011883  Ddes_1895  methyl-accepting chemotaxis sensory transducer  34.73 
 
 
559 aa  201  3e-50  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.191486  n/a   
 
 
-
 
NC_007519  Dde_0434  methyl-accepting chemotaxis sensory transducer  32.82 
 
 
579 aa  200  5e-50  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2177  methyl-accepting chemotaxis sensory transducer  40.19 
 
 
628 aa  199  7e-50  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3890  methyl-accepting chemotaxis protein  28.69 
 
 
529 aa  199  1.0000000000000001e-49  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU0916  methyl-accepting chemotaxis protein  39.62 
 
 
394 aa  195  2e-48  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.00484593  n/a   
 
 
-
 
NC_008609  Ppro_3465  methyl-accepting chemotaxis sensory transducer  39.34 
 
 
423 aa  191  2e-47  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2500  methyl-accepting chemotaxis sensory transducer  41.47 
 
 
557 aa  191  2.9999999999999997e-47  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_0241  methyl-accepting chemotaxis sensory transducer  39.24 
 
 
393 aa  190  4e-47  Geobacter sp. M21  Bacteria  n/a    normal  0.0575576 
 
 
-
 
NC_008700  Sama_0550  putative methyl-accepting chemotaxis sensory transducer  29.2 
 
 
518 aa  188  2e-46  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0126879 
 
 
-
 
NC_011146  Gbem_0257  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
393 aa  186  6e-46  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0492  methyl-accepting chemotaxis sensory transducer  29.44 
 
 
530 aa  184  4.0000000000000006e-45  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  36.74 
 
 
541 aa  184  4.0000000000000006e-45  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008751  Dvul_0230  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
963 aa  181  2e-44  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  31.6 
 
 
664 aa  181  2.9999999999999997e-44  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_010814  Glov_3549  methyl-accepting chemotaxis sensory transducer  38.04 
 
 
393 aa  181  4e-44  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.00000818802  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
638 aa  179  9e-44  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008607  Ppro_3805  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
422 aa  179  1e-43  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000721713  n/a   
 
 
-
 
NC_013501  Rmar_1624  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
626 aa  178  2e-43  Rhodothermus marinus DSM 4252  Bacteria  normal  0.835429  n/a   
 
 
-
 
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