More than 300 homologs were found in PanDaTox collection
for query gene VC0395_0331 on replicon NC_009456
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009456  VC0395_0331  methyl-accepting chemotaxis protein  100 
 
 
578 aa  1177    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2733  methyl-accepting chemotaxis sensory transducer  47.97 
 
 
579 aa  497  1e-139  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1626  methyl-accepting chemotaxis sensory transducer  47.8 
 
 
579 aa  486  1e-136  Shewanella baltica OS223  Bacteria  normal  0.154062  normal  0.0682347 
 
 
-
 
NC_009665  Shew185_2750  methyl-accepting chemotaxis sensory transducer  47.8 
 
 
579 aa  486  1e-136  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2826  methyl-accepting chemotaxis sensory transducer  47.62 
 
 
579 aa  485  1e-136  Shewanella baltica OS195  Bacteria  normal  normal  0.0277282 
 
 
-
 
NC_004347  SO_3052  methyl-accepting chemotaxis protein  46.36 
 
 
579 aa  482  1e-135  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_1436  methyl-accepting chemotaxis sensory transducer  46.89 
 
 
579 aa  483  1e-135  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1501  methyl-accepting chemotaxis sensory transducer  46.89 
 
 
579 aa  481  1e-134  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  35.15 
 
 
602 aa  313  4.999999999999999e-84  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_1025  methyl-accepting chemotaxis domain-containing protein  36.12 
 
 
570 aa  281  2e-74  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0126152  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1754  methyl-accepting chemotaxis domain-containing protein  36.12 
 
 
570 aa  280  4e-74  Burkholderia mallei SAVP1  Bacteria  normal  0.427555  n/a   
 
 
-
 
NC_009076  BURPS1106A_1813  methyl-accepting chemotaxis protein  35.69 
 
 
728 aa  280  6e-74  Burkholderia pseudomallei 1106a  Bacteria  normal  0.403729  n/a   
 
 
-
 
NC_006348  BMA1267  methyl-accepting chemotaxis domain-containing protein  35.69 
 
 
728 aa  280  6e-74  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1794  methyl-accepting chemotaxis protein  36.12 
 
 
644 aa  280  6e-74  Burkholderia pseudomallei 668  Bacteria  normal  0.061359  n/a   
 
 
-
 
NC_007434  BURPS1710b_1967  methyl-accepting chemotaxis domain-containing protein  35.69 
 
 
728 aa  280  7e-74  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2522  methyl-accepting chemotaxis domain-containing protein  35.26 
 
 
605 aa  277  4e-73  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.000107886  n/a   
 
 
-
 
NC_008836  BMA10229_A0141  methyl-accepting chemotaxis domain-containing protein  36.49 
 
 
521 aa  275  2.0000000000000002e-72  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0779698  n/a   
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  36.57 
 
 
568 aa  271  2e-71  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_2227  methyl-accepting chemotaxis sensory transducer  28.94 
 
 
606 aa  220  6e-56  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  39.78 
 
 
541 aa  214  2.9999999999999995e-54  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009438  Sputcn32_1438  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
540 aa  211  3e-53  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2015  methyl-accepting chemotaxis sensory transducer  31.7 
 
 
553 aa  210  5e-53  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  37.53 
 
 
541 aa  210  7e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  38.79 
 
 
541 aa  208  2e-52  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
542 aa  207  5e-52  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
620 aa  206  8e-52  Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_008322  Shewmr7_0792  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
620 aa  206  1e-51  Shewanella sp. MR-7  Bacteria  normal  0.912748  normal  0.850506 
 
 
-
 
NC_008577  Shewana3_0764  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
620 aa  205  2e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  35.99 
 
 
541 aa  204  4e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  38.68 
 
 
541 aa  202  9.999999999999999e-51  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  37.39 
 
 
642 aa  202  9.999999999999999e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
620 aa  202  9.999999999999999e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_009438  Sputcn32_0796  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
620 aa  201  3e-50  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
541 aa  200  7e-50  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  36.89 
 
 
541 aa  199  1.0000000000000001e-49  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
541 aa  198  2.0000000000000003e-49  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
541 aa  197  3e-49  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  36.86 
 
 
642 aa  196  8.000000000000001e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  34.56 
 
 
541 aa  196  1e-48  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  39.94 
 
 
553 aa  195  2e-48  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  35.94 
 
 
620 aa  194  3e-48  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  36.56 
 
 
541 aa  194  4e-48  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008463  PA14_48030  putative methyl-accepting chemotaxis transducer  36.47 
 
 
541 aa  194  5e-48  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.478475 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  34.25 
 
 
621 aa  192  1e-47  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_004347  SO_3838  methyl-accepting chemotaxis protein  36.69 
 
 
620 aa  192  1e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
773 aa  192  2e-47  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  39.74 
 
 
552 aa  192  2e-47  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
544 aa  191  2e-47  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
541 aa  191  2e-47  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  35.48 
 
 
545 aa  191  2.9999999999999997e-47  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  41.57 
 
 
541 aa  191  2.9999999999999997e-47  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  36.02 
 
 
541 aa  191  4e-47  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  39.8 
 
 
545 aa  191  4e-47  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.36 
 
 
712 aa  191  4e-47  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  37.03 
 
 
676 aa  190  5e-47  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  36.68 
 
 
620 aa  191  5e-47  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  38.26 
 
 
545 aa  191  5e-47  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  36.84 
 
 
681 aa  190  5.999999999999999e-47  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  40.19 
 
 
543 aa  190  7e-47  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  36.86 
 
 
553 aa  190  8e-47  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  36.47 
 
 
620 aa  189  9e-47  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  35.87 
 
 
620 aa  189  9e-47  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
620 aa  189  1e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_009052  Sbal_1015  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
541 aa  189  1e-46  Shewanella baltica OS155  Bacteria  unclonable  0.0000000434326  n/a   
 
 
-
 
NC_009665  Shew185_1084  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
541 aa  188  2e-46  Shewanella baltica OS185  Bacteria  hitchhiker  0.000100295  n/a   
 
 
-
 
NC_011663  Sbal223_3274  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
541 aa  188  2e-46  Shewanella baltica OS223  Bacteria  normal  0.0175031  normal  0.083895 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  35.56 
 
 
620 aa  188  2e-46  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  35.56 
 
 
620 aa  188  2e-46  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_009997  Sbal195_1117  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
541 aa  188  3e-46  Shewanella baltica OS195  Bacteria  normal  0.0100073  normal  0.0339889 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  35.51 
 
 
712 aa  188  3e-46  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  35.14 
 
 
629 aa  188  3e-46  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  36.08 
 
 
546 aa  188  3e-46  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  36.1 
 
 
541 aa  187  4e-46  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  37.07 
 
 
648 aa  187  6e-46  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
572 aa  186  7e-46  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
541 aa  186  7e-46  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  35.56 
 
 
541 aa  186  8e-46  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  35.42 
 
 
541 aa  186  9e-46  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  34.16 
 
 
620 aa  186  1.0000000000000001e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  38.66 
 
 
541 aa  186  1.0000000000000001e-45  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  38.71 
 
 
541 aa  186  1.0000000000000001e-45  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  38.71 
 
 
541 aa  186  1.0000000000000001e-45  Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
541 aa  185  2.0000000000000003e-45  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
541 aa  185  2.0000000000000003e-45  Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  39.47 
 
 
544 aa  184  3e-45  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
653 aa  184  4.0000000000000006e-45  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  37.61 
 
 
552 aa  184  4.0000000000000006e-45  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  34.86 
 
 
640 aa  184  4.0000000000000006e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  37.46 
 
 
411 aa  183  6e-45  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1210  methyl-accepting chemotaxis sensory transducer  36.01 
 
 
540 aa  183  8.000000000000001e-45  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.289047 
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
572 aa  183  9.000000000000001e-45  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  35.53 
 
 
541 aa  182  1e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
620 aa  182  1e-44  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  37.5 
 
 
569 aa  183  1e-44  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_009654  Mmwyl1_2773  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
540 aa  182  1e-44  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2643  methyl-accepting chemotaxis sensory transducer  30.86 
 
 
550 aa  181  2e-44  Pseudomonas putida KT2440  Bacteria  normal  0.0855376  normal 
 
 
-
 
NC_004578  PSPTO_5554  methyl-accepting chemotaxis protein  35.73 
 
 
676 aa  181  2e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1150  chemotaxis sensory transducer  33.42 
 
 
551 aa  182  2e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  35.16 
 
 
543 aa  182  2e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  35.59 
 
 
541 aa  182  2e-44  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
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